RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 NAPRTQ6XQN6 538 aa22.68■■□□□ 1.22
C9orf3-215ENST00000478473 VRK3Q8IV63 474 aa22.68■■□□□ 1.22
C9orf3-215ENST00000478473 PANX3Q96QZ0 392 aa22.68■■□□□ 1.22
C9orf3-215ENST00000478473 OR2A14Q96R47 310 aa22.68■■□□□ 1.22
C9orf3-215ENST00000478473 ARHGAP9Q9BRR9 750 aa22.68■■□□□ 1.22
C9orf3-215ENST00000478473 XKR8Q9H6D3 395 aa22.68■■□□□ 1.22
C9orf3-215ENST00000478473 XAB2Q9HCS7 855 aaKnown RBP22.68■■□□□ 1.22
C9orf3-215ENST00000478473 SNX12Q9UMY4 172 aa22.68■■□□□ 1.22
C9orf3-215ENST00000478473 GCN1Q92616 2671 aaKnown RBP22.67■■□□□ 1.22
C9orf3-215ENST00000478473 SPTA1P02549 2419 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 PIPSLA2A3N6 862 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 IQCF5A8MTL0 148 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 KPNA5O15131 536 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 CPNE3O75131 537 aaKnown RBP22.67■■□□□ 1.22
C9orf3-215ENST00000478473 PHF2O75151 1096 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 TMEM63AO94886 807 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 VAPBO95292 243 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 APOA4P06727 396 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 FAM87AP0C7U9 286 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 TCN2P20062 427 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 OAS2P29728 719 aaKnown RBP22.67■■□□□ 1.22
C9orf3-215ENST00000478473 HSPA14Q0VDF9 509 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 KYNUQ16719 465 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 MRNIPQ6NTE8 343 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 PDLIM2Q96JY6 352 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 BIRC8Q96P09 236 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 GPR87Q9BY21 358 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 SOHLH2Q9NX45 425 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 GNPTGQ9UJJ9 305 aa22.67■■□□□ 1.22
C9orf3-215ENST00000478473 FAM237BA0A1B0GVD1 139 aa22.66■■□□□ 1.22
C9orf3-215ENST00000478473 NDUFS3O75489 264 aa22.66■■□□□ 1.22
C9orf3-215ENST00000478473 SCRG1O75711 98 aa22.66■■□□□ 1.22
C9orf3-215ENST00000478473 CHRM5P08912 532 aaPredicted RBP22.66■■□□□ 1.22
C9orf3-215ENST00000478473 OGNP20774 298 aaKnown RBP22.66■■□□□ 1.22
C9orf3-215ENST00000478473 DNASE1L3Q13609 305 aa22.66■■□□□ 1.22
C9orf3-215ENST00000478473 GRB7Q14451 532 aa22.66■■□□□ 1.22
C9orf3-215ENST00000478473 GBX1Q14549 363 aa22.66■■□□□ 1.22
C9orf3-215ENST00000478473 RNF187Q5TA31 235 aaPredicted RBP22.66■■□□□ 1.22
C9orf3-215ENST00000478473 ZNF605Q86T29 641 aa22.66■■□□□ 1.22
C9orf3-215ENST00000478473 TMEM135Q86UB9 458 aa22.66■■□□□ 1.22
C9orf3-215ENST00000478473 SLC38A9Q8NBW4 561 aa22.66■■□□□ 1.22
C9orf3-215ENST00000478473 LPGAT1Q92604 370 aa22.66■■□□□ 1.22
C9orf3-215ENST00000478473 H3BMH7 237 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 KIF5CO60282 957 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 AVILO75366 819 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 NTRK1P04629 796 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 RPN2P04844 631 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 PLA2G2AP14555 144 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 UGT2B7P16662 529 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 RORAP35398 523 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 CCR10P46092 362 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 GABRA4P48169 554 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 VPS41P49754 854 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 RAB28P51157 221 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 KIR2DS3Q14952 304 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 SLC5A12Q1EHB4 618 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 PLEKHS1Q5SXH7 462 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 PTRHD1Q6GMV3 140 aaKnown RBP22.65■■□□□ 1.22
C9orf3-215ENST00000478473 SDCCAG8Q86SQ7 713 aaPredicted RBP22.65■■□□□ 1.22
C9orf3-215ENST00000478473 DCUN1D3Q8IWE4 304 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 KRT222Q8N1A0 295 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 NAT8LQ8N9F0 302 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 CT55Q8WUE5 264 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 SLCO2A1Q92959 643 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 TCTN2Q96GX1 697 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 SERPINB12Q96P63 405 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 AKIRIN1Q9H9L7 192 aaPredicted RBP22.65■■□□□ 1.22
C9orf3-215ENST00000478473 FANCEQ9HB96 536 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 SPHK1Q9NYA1 384 aa22.65■■□□□ 1.22
C9orf3-215ENST00000478473 MRPS18BQ9Y676 258 aaKnown RBP22.65■■□□□ 1.22
C9orf3-215ENST00000478473 SDR42E2A6NKP2 422 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 MAP3K7O43318 606 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 CREG1O75629 220 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 ESR1P03372 595 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 PKLRP30613 574 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 POLE2P56282 527 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 ABRQ12979 859 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 GPS2Q13227 327 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 TMED2Q15363 201 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 KCTD19Q17RG1 926 aaPredicted RBP22.64■■□□□ 1.21
C9orf3-215ENST00000478473 CTSL3PQ5NE16 218 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 CES3Q6UWW8 571 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 CDHR3Q6ZTQ4 885 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 TMEM126BQ8IUX1 230 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 OR1L3Q8NH93 324 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 GRK7Q8WTQ7 553 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 SEC14L1Q92503 715 aa22.64■■□□□ 1.21
C9orf3-215ENST00000478473 BSNQ9UPA5 3926 aa22.63■■□□□ 1.21
C9orf3-215ENST00000478473 H3BMM5 538 aa22.63■■□□□ 1.21
C9orf3-215ENST00000478473 PFDN6O15212 129 aa22.63■■□□□ 1.21
C9orf3-215ENST00000478473 PVRP15151 417 aa22.63■■□□□ 1.21
C9orf3-215ENST00000478473 PAMP19021 973 aa22.63■■□□□ 1.21
C9orf3-215ENST00000478473 ATP5DP30049 168 aa22.63■■□□□ 1.21
C9orf3-215ENST00000478473 PEBP1P30086 187 aaKnown RBP22.63■■□□□ 1.21
C9orf3-215ENST00000478473 ANKRD20A4Q4UJ75 823 aa22.63■■□□□ 1.21
C9orf3-215ENST00000478473 IZUMO3Q5VZ72 239 aa22.63■■□□□ 1.21
C9orf3-215ENST00000478473 CENPUQ71F23 418 aa22.63■■□□□ 1.21
C9orf3-215ENST00000478473 CILP2Q8IUL8 1156 aa22.63■■□□□ 1.21
C9orf3-215ENST00000478473 DSELQ8IZU8 1212 aa22.63■■□□□ 1.21
C9orf3-215ENST00000478473 C19orf47Q8N9M1 422 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms