RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 RASGRP3Q8IV61 690 aa18.49■□□□□ 0.55
GMDS-204ENST00000476972 KRT222Q8N1A0 295 aa18.49■□□□□ 0.55
GMDS-204ENST00000476972 MCUQ8NE86 351 aa18.49■□□□□ 0.55
GMDS-204ENST00000476972 SERPINB12Q96P63 405 aa18.49■□□□□ 0.55
GMDS-204ENST00000476972 TRIM56Q9BRZ2 755 aaKnown RBP18.49■□□□□ 0.55
GMDS-204ENST00000476972 CARD6Q9BX69 1037 aa18.49■□□□□ 0.55
GMDS-204ENST00000476972 P2RY12Q9H244 342 aa18.49■□□□□ 0.55
GMDS-204ENST00000476972 XKR8Q9H6D3 395 aa18.49■□□□□ 0.55
GMDS-204ENST00000476972 XAB2Q9HCS7 855 aaKnown RBP18.49■□□□□ 0.55
GMDS-204ENST00000476972 ANKMY1Q9P2S6 941 aa18.49■□□□□ 0.55
GMDS-204ENST00000476972 ICKQ9UPZ9 632 aa18.49■□□□□ 0.55
GMDS-204ENST00000476972 CDYLQ9Y232 598 aa18.49■□□□□ 0.55
GMDS-204ENST00000476972 NDUFS3O75489 264 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 KIAA0754O94854 1291 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 ZBTB11O95625 1053 aaPredicted RBP18.48■□□□□ 0.55
GMDS-204ENST00000476972 ARL4DP49703 201 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 GNG11P61952 73 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 HSD11B2P80365 405 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 HSPA14Q0VDF9 509 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 ARMC3Q5W041 872 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 PTRHD1Q6GMV3 140 aaKnown RBP18.48■□□□□ 0.55
GMDS-204ENST00000476972 CYB5D1Q6P9G0 228 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 AMIGO1Q86WK6 493 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 PPP1R3BQ86XI6 285 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 VRK3Q8IV63 474 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 TBC1D21Q8IYX1 336 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 SLC22A15Q8IZD6 547 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 CARFQ8N187 725 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 D2HGDHQ8N465 521 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 NAT8LQ8N9F0 302 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 DDX47Q9H0S4 455 aaKnown RBP18.48■□□□□ 0.55
GMDS-204ENST00000476972 SAMD15Q9P1V8 674 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 GNPTGQ9UJJ9 305 aa18.48■□□□□ 0.55
GMDS-204ENST00000476972 GPC4O75487 556 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 SPAG6O75602 509 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 TIAF1O95411 115 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 CDH3P22223 829 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 RPS3P23396 243 aaKnown RBP eCLIP18.47■□□□□ 0.559e-9■□□□□ 8.9
GMDS-204ENST00000476972 AOAHP28039 575 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 DLSTP36957 453 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 ACY1Q03154 408 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 PPP1R7Q15435 360 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 TYSND1Q2T9J0 566 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.47■□□□□ 0.55
GMDS-204ENST00000476972 LACTB2Q53H82 288 aaPredicted RBP18.47■□□□□ 0.55
GMDS-204ENST00000476972 MRNIPQ6NTE8 343 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 LRRC6Q86X45 466 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 ADGRF3Q8IZF5 1079 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 GALNT6Q8NCL4 622 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 OR5K2Q8NHB8 316 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 ASZ1Q8WWH4 475 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 PDE7BQ9NP56 450 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 FGF21Q9NSA1 209 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 SOHLH2Q9NX45 425 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 IL1RAPL1Q9NZN1 696 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 LNPEPQ9UIQ6 1025 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 CROTQ9UKG9 612 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 RARRES3Q9UL19 164 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 TDRKHQ9Y2W6 561 aaKnown RBP18.47■□□□□ 0.55
GMDS-204ENST00000476972 PCDHB3Q9Y5E6 796 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 KCNMB2Q9Y691 235 aa18.47■□□□□ 0.55
GMDS-204ENST00000476972 APOA4P06727 396 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 PAMP19021 973 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 PRDX3P30048 256 aaKnown RBP18.46■□□□□ 0.55
GMDS-204ENST00000476972 SHMT2P34897 504 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 MAGEA3P43357 314 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 EIF3BP55884 814 aaKnown RBP18.46■□□□□ 0.55
GMDS-204ENST00000476972 ERV3-1Q14264 604 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 TMED2Q15363 201 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 CTSL3PQ5NE16 218 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 AGGF1Q8N302 714 aaeCLIP18.46■□□□□ 0.55
GMDS-204ENST00000476972 LPGAT1Q92604 370 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 ZNF669Q96BR6 464 aaPredicted RBP18.46■□□□□ 0.55
GMDS-204ENST00000476972 CAPZA3Q96KX2 299 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 PANX3Q96QZ0 392 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 PITPNM3Q9BZ71 974 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 C1GALT1Q9NS00 363 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 ACTR10Q9NZ32 417 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 POLG2Q9UHN1 485 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 PLAGL1Q9UM63 463 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 PLAAQ9Y263 795 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 BTRCQ9Y297 605 aa18.46■□□□□ 0.55
GMDS-204ENST00000476972 FAM237BA0A1B0GVD1 139 aa18.45■□□□□ 0.54
GMDS-204ENST00000476972 SLC9B1P1A6NJY1 282 aa18.45■□□□□ 0.54
GMDS-204ENST00000476972 SDR42E2A6NKP2 422 aa18.45■□□□□ 0.54
GMDS-204ENST00000476972 C2orf74A8MZ97 194 aa18.45■□□□□ 0.54
GMDS-204ENST00000476972 K7EM74 188 aa18.45■□□□□ 0.54
GMDS-204ENST00000476972 KATNA1O75449 491 aa18.45■□□□□ 0.54
GMDS-204ENST00000476972 FURINP09958 794 aa18.45■□□□□ 0.54
GMDS-204ENST00000476972 TPBGLP0DKB5 382 aa18.45■□□□□ 0.54
GMDS-204ENST00000476972 ST6GAL1P15907 406 aa18.45■□□□□ 0.54
GMDS-204ENST00000476972 OGNP20774 298 aaKnown RBP18.45■□□□□ 0.54
GMDS-204ENST00000476972 TUBB4BP68371 445 aa18.45■□□□□ 0.54
GMDS-204ENST00000476972 TUBB2AQ13885 445 aa18.45■□□□□ 0.54
GMDS-204ENST00000476972 DHX34Q14147 1143 aaKnown RBP18.45■□□□□ 0.54
GMDS-204ENST00000476972 GPR19Q15760 415 aa18.45■□□□□ 0.54
GMDS-204ENST00000476972 ANKRD20A4Q4UJ75 823 aa18.45■□□□□ 0.54
GMDS-204ENST00000476972 DNAJC21Q5F1R6 531 aaKnown RBP18.45■□□□□ 0.54
GMDS-204ENST00000476972 RNF187Q5TA31 235 aaPredicted RBP18.45■□□□□ 0.54
GMDS-204ENST00000476972 RNASEH2BQ5TBB1 312 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms