RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 APOA4P06727 396 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 EBLN1P0CF75 366 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 POLR2CP19387 275 aaPredicted RBP15.71■□□□□ 0.11
COL1A1-205ENST00000476387 ARCN1P48444 511 aaKnown RBP15.71■□□□□ 0.11
COL1A1-205ENST00000476387 CSE1LP55060 971 aaKnown RBP15.71■□□□□ 0.11
COL1A1-205ENST00000476387 TUBB4BP68371 445 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 DNASE1L3Q13609 305 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 TUBB2AQ13885 445 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 KCNAB1Q14722 419 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 RNF187Q5TA31 235 aaPredicted RBP15.71■□□□□ 0.11
COL1A1-205ENST00000476387 ATP1A1-AS1Q5TC04 95 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 PWWP2BQ6NUJ5 590 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 NAPRTQ6XQN6 538 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 CAND1Q86VP6 1230 aaKnown RBP15.71■□□□□ 0.11
COL1A1-205ENST00000476387 LRRC6Q86X45 466 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 PPIL6Q8IXY8 311 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 PHC3Q8NDX5 983 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 OR52E1Q8NGJ3 308 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 ASZ1Q8WWH4 475 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 ZNF669Q96BR6 464 aaPredicted RBP15.71■□□□□ 0.11
COL1A1-205ENST00000476387 SERPINB12Q96P63 405 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 PANX3Q96QZ0 392 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 TUBB2BQ9BVA1 445 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 CARD6Q9BX69 1037 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 LHX9Q9NQ69 397 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 POLHQ9Y253 713 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 KCNMB2Q9Y691 235 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 SAR1BQ9Y6B6 198 aa15.71■□□□□ 0.11
COL1A1-205ENST00000476387 HECTD1Q9ULT8 2610 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 SNRNP200O75643 2136 aaKnown RBP15.7■□□□□ 0.1
COL1A1-205ENST00000476387 SDR42E2A6NKP2 422 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 KDM1AO60341 852 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 KATNA1O75449 491 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 TIAF1O95411 115 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 ARNTP27540 789 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 KPNA2P52292 529 aaKnown RBP15.7■□□□□ 0.1
COL1A1-205ENST00000476387 EIF3BP55884 814 aaKnown RBP15.7■□□□□ 0.1
COL1A1-205ENST00000476387 HSPA14Q0VDF9 509 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 PRKG2Q13237 762 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 PAPD7Q5XG87 772 aaKnown RBP15.7■□□□□ 0.1
COL1A1-205ENST00000476387 PTRH1Q86Y79 214 aaKnown RBP15.7■□□□□ 0.1
COL1A1-205ENST00000476387 TBC1D21Q8IYX1 336 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 OR5AR1Q8NGP9 310 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 GSDMBQ8TAX9 411 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 CT55Q8WUE5 264 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 SEC14L1Q92503 715 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 ABHD17AQ96GS6 310 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 GPR87Q9BY21 358 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 TFB2MQ9H5Q4 396 aaKnown RBP15.7■□□□□ 0.1
COL1A1-205ENST00000476387 LATS2Q9NRM7 1088 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 SOHLH2Q9NX45 425 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 POLG2Q9UHN1 485 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 POMT2Q9UKY4 750 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 BTRCQ9Y297 605 aa15.7■□□□□ 0.1
COL1A1-205ENST00000476387 FAM237BA0A1B0GVD1 139 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 MAGEB16A2A368 324 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 IQCF5A8MTL0 148 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 GOLGA8KD6RF30 607 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 GOLGA8TH3BQL2 631 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 CREG1O75629 220 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 RPN2P04844 631 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 OGNP20774 298 aaKnown RBP15.69■□□□□ 0.1
COL1A1-205ENST00000476387 CDH3P22223 829 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 RPS3P23396 243 aaKnown RBP eCLIP15.69■□□□□ 0.1
COL1A1-205ENST00000476387 ACADLP28330 430 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 CCR7P32248 378 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 SHMT2P34897 504 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 CASRP41180 1078 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 PAFAH1B1P43034 410 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 TLE1Q04724 770 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 PTK6Q13882 451 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 DHX34Q14147 1143 aaKnown RBP15.69■□□□□ 0.1
COL1A1-205ENST00000476387 ERV3-1Q14264 604 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 LACTB2Q53H82 288 aaPredicted RBP15.69■□□□□ 0.1
COL1A1-205ENST00000476387 DNAJC21Q5F1R6 531 aaKnown RBP15.69■□□□□ 0.1
COL1A1-205ENST00000476387 TMTC4Q5T4D3 741 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 AMIGO1Q86WK6 493 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 SLC22A15Q8IZD6 547 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 KRT222Q8N1A0 295 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 NAT8LQ8N9F0 302 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 LKAAEAR1Q8TD35 194 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 SLCO2A1Q92959 643 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 RNF31Q96EP0 1072 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 RUNDC3BQ96NL0 473 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 TCF12Q99081 682 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 PCYOX1Q9UHG3 505 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 VPS9D1Q9Y2B5 631 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 TDRKHQ9Y2W6 561 aaKnown RBP15.69■□□□□ 0.1
COL1A1-205ENST00000476387 MAD1L1Q9Y6D9 718 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 PTPN13Q12923 2485 aa15.69■□□□□ 0.1
COL1A1-205ENST00000476387 PIPSLA2A3N6 862 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 C2orf74A8MZ97 194 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 BHMG1C9JSJ3 638 aaPredicted RBP15.68■□□□□ 0.1
COL1A1-205ENST00000476387 BTN3A1O00481 513 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 DNALI1O14645 258 aaPredicted RBP15.68■□□□□ 0.1
COL1A1-205ENST00000476387 KPNA5O15131 536 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 MAP3K7O43318 606 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 CPNE3O75131 537 aaKnown RBP15.68■□□□□ 0.1
COL1A1-205ENST00000476387 FURINP09958 794 aa15.68■□□□□ 0.1
COL1A1-205ENST00000476387 AOAHP28039 575 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms