RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 CAPN6Q9Y6Q1 641 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 PTPN13Q12923 2485 aa6.79□□□□□ -1.32
HDAC3-207ENST00000475549 USP9YO00507 2555 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-207ENST00000475549 NAV2Q8IVL1 2488 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 IQCF5A8MTL0 148 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 C2orf74A8MZ97 194 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 MIF4GDA9UHW6 222 aaKnown RBP6.78□□□□□ -1.32
HDAC3-207ENST00000475549 LIN7AO14910 233 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-207ENST00000475549 LIASO43766 372 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 TMEM63AO94886 807 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 GOT2P00505 430 aaKnown RBP6.78□□□□□ -1.32
HDAC3-207ENST00000475549 CHRM5P08912 532 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-207ENST00000475549 ZSCAN5DPP0CG00 497 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 RNF224P0DH78 156 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 CBSLP0DN79 551 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 ITGAXP20702 1163 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 STIP1P31948 543 aaKnown RBP6.78□□□□□ -1.32
HDAC3-207ENST00000475549 CCR7P32248 378 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 CBSP35520 551 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 NSG1P42857 185 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 GCGRP47871 477 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 GSDMDP57764 484 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 KIF5AQ12840 1032 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 NCF4Q15080 339 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 SIX1Q15475 284 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-207ENST00000475549 DEFB110Q30KQ9 67 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 P3H1Q32P28 736 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 PRR30Q53SZ7 412 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-207ENST00000475549 KIAA1328Q86T90 577 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 TBC1D21Q8IYX1 336 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 DNAJC22Q8N4W6 341 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 FAM26EQ8N5C1 309 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 UBL4BQ8N7F7 174 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 RBMXL3Q8N7X1 1067 aaKnown RBP6.78□□□□□ -1.32
HDAC3-207ENST00000475549 C19orf47Q8N9M1 422 aaKnown RBP6.78□□□□□ -1.32
HDAC3-207ENST00000475549 LINC01555Q8NAE3 123 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 TTC13Q8NBP0 860 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 OR5K2Q8NHB8 316 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 LKAAEAR1Q8TD35 194 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 C1orf54Q8WWF1 131 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 SEC14L1Q92503 715 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 CPT1BQ92523 772 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 TCTN2Q96GX1 697 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 GBP5Q96PP8 586 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 PPP1R2P1Q96PQ5 205 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 SLC25A23Q9BV35 468 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 NUDT9Q9BW91 350 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 CHRNA10Q9GZZ6 450 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 SYTL2Q9HCH5 934 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 CASS4Q9NQ75 786 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 ACSS2Q9NR19 701 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 MARCH4Q9P2E8 410 aaPredicted RBP6.78□□□□□ -1.32
HDAC3-207ENST00000475549 IMPACTQ9P2X3 320 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 DHCR7Q9UBM7 475 aaKnown RBP6.78□□□□□ -1.32
HDAC3-207ENST00000475549 CIDEBQ9UHD4 219 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 SERTAD3Q9UJW9 196 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 SNX7Q9UNH6 387 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 ASF1AQ9Y294 204 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 KLHL20Q9Y2M5 609 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 MAP4K5Q9Y4K4 846 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 PCSK5Q92824 1860 aa6.78□□□□□ -1.32
HDAC3-207ENST00000475549 GOLGA6L9A6NEM1 432 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 A6NL46 340 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 TTLL8A6PVC2 850 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 E7EQ34 232 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 ZNF185O15231 689 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 GPC4O75487 556 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 OR2B3O76000 313 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 IPO7O95373 1038 aaKnown RBP6.77□□□□□ -1.33
HDAC3-207ENST00000475549 GSTM1P09488 218 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 CYP2A7P20853 494 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 GNLYP22749 145 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 CETN2P41208 172 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 CSE1LP55060 971 aaKnown RBP6.77□□□□□ -1.33
HDAC3-207ENST00000475549 GSTM4Q03013 218 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 CDH17Q12864 832 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 SNX1Q13596 522 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 RAPSNQ13702 412 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 ATP1A4Q13733 1029 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 ITIH4Q14624 930 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 TSTD2Q5T7W7 516 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 C1orf189Q5VU69 101 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 HIST2H2BCQ6DN03 193 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 RHBDD2Q6NTF9 364 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 JMJD6Q6NYC1 403 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-207ENST00000475549 LINC00523Q86TU6 105 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 SLC13A5Q86YT5 568 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-207ENST00000475549 SLC22A15Q8IZD6 547 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 SYCE1Q8N0S2 351 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 KRT222Q8N1A0 295 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 C2orf73Q8N5S3 287 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-207ENST00000475549 ZNF655Q8N720 491 aaPredicted RBP6.77□□□□□ -1.33
HDAC3-207ENST00000475549 OR4L1Q8NH43 312 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 ELMO1Q92556 727 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 C19orf60Q96EN9 201 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 RANBP9Q96S59 729 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 AP1M1Q9BXS5 423 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 VPS37BQ9H9H4 285 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 CHRAC1Q9NRG0 131 aa6.77□□□□□ -1.33
HDAC3-207ENST00000475549 OR6C2Q9NZP2 312 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms