RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CD68P34810 354 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 FOLR3P41439 243 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 CHRNA4P43681 627 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 GABRA4P48169 554 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 TDGF1P3P51864 188 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 WNT3AP56704 352 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 DCDP81605 110 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 OTUD4Q01804 1114 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 CDC16Q13042 620 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 ITGA9Q13797 1035 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 KRT33BQ14525 404 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 ZNF169Q14929 603 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 SLC9A5Q14940 896 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 PDK1Q15118 436 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 TESK1Q15569 626 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 ZIC1Q15915 447 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 NKAIN1Q4KMZ8 207 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 TEX44Q53QW1 395 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 PRAMEF13Q5VWM6 474 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 SLC9A4Q6AI14 798 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 ZNF324BQ6AW86 544 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 CCDC70Q6NSX1 233 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 KDELC1Q6UW63 502 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 GLT6D1Q7Z4J2 308 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 TRIM73Q86UV7 250 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 CFAP206Q8IYR0 622 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 GPR135Q8IZ08 494 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 ADGRF3Q8IZF5 1079 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 C19orf47Q8N9M1 422 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 OR52E1Q8NGJ3 308 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 DNAJB14Q8TBM8 379 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 HM13Q8TCT9 377 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 ITLN2Q8WWU7 325 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 LCN9Q8WX39 176 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 RELTQ969Z4 430 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 NACC2Q96BF6 587 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 PTERQ96BW5 349 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 CNDP1Q96KN2 507 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 TEKT5Q96M29 485 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 TRIM56Q9BRZ2 755 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 AP1M1Q9BXS5 423 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 TRIM8Q9BZR9 551 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 CHRNA10Q9GZZ6 450 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 OR52A5Q9H2C5 316 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 DEF6Q9H4E7 631 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 TFB2MQ9H5Q4 396 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 GLOD4Q9HC38 313 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 CHST11Q9NPF2 352 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 UBP1Q9NZI7 540 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 IFT80Q9P2H3 777 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 DHCR7Q9UBM7 475 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 NDOR1Q9UHB4 597 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 FAM153AQ9UHL3 310 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 GPN3Q9UHW5 284 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 FBXL4Q9UKA2 621 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 PKP3Q9Y446 797 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 HEBP2Q9Y5Z4 205 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 AP1M2Q9Y6Q5 423 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 CCDC88CQ9P219 2028 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 NUP210LQ5VU65 1888 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 HRNRQ86YZ3 2850 aaPredicted RBP4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 A0A087X0T9 212 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 CCDC78A2IDD5 438 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 C3orf70A6NLC5 250 aaPredicted RBP4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 C2orf74A8MZ97 194 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 SOCS6O14544 535 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 PCDH17O14917 1159 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 PPP1R12AO14974 1030 aaPredicted RBP4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 JRKO75564 520 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 EPOP01588 193 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 CD63P08962 238 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 FAM228BP0C875 321 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 CD1EP15812 388 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 NFKB1P19838 968 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 ITGAXP20702 1163 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 MMP11P24347 488 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 KDELR1P24390 212 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 PTPN3P26045 913 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 HTR1EP28566 365 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 PRLHRP49683 370 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 KCNK10P57789 538 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 WASHC5Q12768 1159 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 BOP1Q14137 746 aaKnown RBP4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 PTPRCAPQ14761 206 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 PRKD1Q15139 912 aaPredicted RBP4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 TLR1Q15399 786 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 SLC1A5Q15758 541 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 STX1AQ16623 288 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 ZNF630Q2M218 657 aaPredicted RBP4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 ZNF658BQ4V348 819 aaPredicted RBP4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 AGAP7PQ5VUJ5 663 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 FCRL6Q6DN72 434 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 SARM1Q6SZW1 724 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 SPESP1Q6UW49 350 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 FAM180AQ6UWF9 173 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 KIRREL2Q6UWL6 708 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 NPNTQ6UXI9 565 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 BNC2Q6ZN30 1099 aaPredicted RBP4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 AMIGO1Q86WK6 493 aa4.94□□□□□ -1.62
SNRNP40-204ENST00000474025 VSIG1Q86XK7 387 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms