RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 NCAPH2Q6IBW4 605 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 KIAA0930Q6ICG6 404 aaPredicted RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 LRRC8EQ6NSJ5 796 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 RPUSD3Q6P087 351 aaKnown RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 AAGABQ6PD74 315 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 LCTLQ6UWM7 567 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 GLDNQ6ZMI3 551 aaPredicted RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 RBM44Q6ZP01 1051 aaKnown RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 FAM43BQ6ZT52 329 aaPredicted RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 CHST3Q7LGC8 479 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 TIPARPQ7Z3E1 657 aaKnown RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 CREBRFQ8IUR6 639 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 DHX40Q8IX18 779 aaKnown RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 FAM185AQ8N0U4 392 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 OR8H3Q8N146 312 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 CCAR2Q8N163 923 aaKnown RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 ARL10Q8N8L6 244 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 GJC3Q8NFK1 279 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 SETD6Q8TBK2 473 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 HDAC7Q8WUI4 952 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 ATP6V0A1Q93050 837 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 FUBP1Q96AE4 644 aaKnown RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 MIB2Q96AX9 1013 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 SLC22A18Q96BI1 424 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 ZNF707Q96C28 371 aaPredicted RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 RNF183Q96D59 192 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 ARHGEF26Q96DR7 871 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 ELMOD3Q96FG2 381 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 MSANTD3Q96H12 275 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 ZFYVE19Q96K21 471 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 ZNF558Q96NG5 402 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 FCRL5Q96RD9 977 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 PLEKHF1Q96S99 279 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 ABHD1Q96SE0 405 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 GAD1Q99259 594 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 PAFAH2Q99487 392 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 CITED2Q99967 270 aaPredicted RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 KXD1Q9BQD3 176 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 SRSF8Q9BRL6 282 aaKnown RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 GTPBP2Q9BX10 602 aaKnown RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 STRA6Q9BX79 667 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 PLA2G2FQ9BZM2 168 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 ZBP1Q9H171 429 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 SCPEP1Q9HB40 452 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 IL17RBQ9NRM6 502 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 SLC22A11Q9NSA0 550 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 SPATS2LQ9NUQ6 558 aaKnown RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 AATFQ9NY61 560 aaKnown RBP eCLIP2.34□□□□□ -2.03
CALD1-216ENST00000473714 PLK2Q9NYY3 685 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 SPG21Q9NZD8 308 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 AMACRQ9UHK6 382 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 ANAPC2Q9UJX6 822 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 GTF3C4Q9UKN8 822 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 CDH7Q9ULB5 785 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 ERVK-11Q9UQG0 969 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 NUDCQ9Y266 331 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 LSM4Q9Y4Z0 139 aaKnown RBP2.34□□□□□ -2.03
CALD1-216ENST00000473714 DOCK5Q9H7D0 1870 aa2.34□□□□□ -2.03
CALD1-216ENST00000473714 BAZ2BQ9UIF8 2168 aaKnown RBP2.34□□□□□ -2.04
CALD1-216ENST00000473714 UBE4BO95155 1302 aa2.34□□□□□ -2.04
CALD1-216ENST00000473714 PKD1L1Q8TDX9 2849 aa2.34□□□□□ -2.04
CALD1-216ENST00000473714 KMT2CQ8NEZ4 4911 aaKnown RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 FAM237AA0A1B0GTK4 181 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 A0A1W2PQM1 296 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 C17orf102A2RUQ5 167 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 GLOD5A6NK44 160 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 SMTNL1A8MU46 457 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 H7C1Q1 480 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 MPHOSPH10O00566 681 aaKnown RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 MGST3O14880 152 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 ADAM20O43506 726 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 ATG13O75143 517 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 PLAUP00749 431 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 HIST1H2ABP04908 130 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 LCKP06239 509 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 ATP5BP06576 529 aaKnown RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 HEXAP06865 529 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 SERPINF2P08697 491 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 CHRM5P08912 532 aaPredicted RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 QDPRP09417 244 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 SELLP14151 372 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 GABRB1P18505 474 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 HIST1H2ADP20671 130 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 IL11P20809 199 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 MUTP22033 750 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 CCNE1P24864 410 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 IDUAP35475 653 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 SLC16A2P36021 539 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 DHPSP49366 369 aaPredicted RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 HSD17B4P51659 736 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 POLGP54098 1239 aaPredicted RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 YPEL5P62699 121 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 RHAGQ02094 409 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 GAD2Q05329 585 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 ZBTB16Q05516 673 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 GFPT1Q06210 699 aaPredicted RBP2.33□□□□□ -2.04
CALD1-216ENST00000473714 ARHGAP1Q07960 439 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 MGAT3Q09327 533 aa2.33□□□□□ -2.04
CALD1-216ENST00000473714 GRSF1Q12849 480 aaKnown RBP eCLIP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms