RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PRKAR2AP13861 404 aaKnown RBP20.68■□□□□ 0.9
COL18A1-207ENST00000473212 C5orf22Q49AR2 442 aa20.68■□□□□ 0.9
COL18A1-207ENST00000473212 CXorf57Q6NSI4 855 aaKnown RBP20.68■□□□□ 0.9
COL18A1-207ENST00000473212 MTFMTQ96DP5 389 aaKnown RBP20.68■□□□□ 0.9
COL18A1-207ENST00000473212 ITCHQ96J02 903 aa20.68■□□□□ 0.9
COL18A1-207ENST00000473212 PPP3R2Q96LZ3 170 aa20.68■□□□□ 0.9
COL18A1-207ENST00000473212 P2RY12Q9H244 342 aa20.68■□□□□ 0.9
COL18A1-207ENST00000473212 MANSC4A6NHS7 340 aaPredicted RBP20.68■□□□□ 0.9
COL18A1-207ENST00000473212 FFAR2O15552 330 aa20.68■□□□□ 0.9
COL18A1-207ENST00000473212 OTCP00480 354 aa20.68■□□□□ 0.9
COL18A1-207ENST00000473212 S100BP04271 92 aaPredicted RBP20.68■□□□□ 0.9
COL18A1-207ENST00000473212 PCMT1P22061 227 aa20.68■□□□□ 0.9
COL18A1-207ENST00000473212 DCTP40126 519 aa20.68■□□□□ 0.9
COL18A1-207ENST00000473212 PON2Q15165 354 aa20.68■□□□□ 0.9
COL18A1-207ENST00000473212 TRIM16LQ309B1 348 aa20.68■□□□□ 0.9
COL18A1-207ENST00000473212 GCNT7Q6ZNI0 430 aa20.68■□□□□ 0.9
COL18A1-207ENST00000473212 ABCG8Q9H221 673 aa20.68■□□□□ 0.9
COL18A1-207ENST00000473212 EIF3LQ9Y262 564 aaKnown RBP20.68■□□□□ 0.9
COL18A1-207ENST00000473212 INVSQ9Y283 1065 aa20.68■□□□□ 0.9
COL18A1-207ENST00000473212 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.67■□□□□ 0.9
COL18A1-207ENST00000473212 TOR1BO14657 336 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 ESR1P03372 595 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 PTGER3P43115 390 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 ZNF177Q13360 481 aaPredicted RBP20.67■□□□□ 0.9
COL18A1-207ENST00000473212 CTF1Q16619 201 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 FUT10Q6P4F1 479 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 EID3Q8N140 333 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 PARP8Q8N3A8 854 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 CNIH3Q8TBE1 160 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 DPY30Q9C005 99 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 C3orf18Q9UK00 162 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 CLDN25C9JDP6 229 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 H0Y626 953 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 XPNPEP2O43895 674 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 NDUFS2O75306 463 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 STC2O76061 302 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 TRIM16O95361 564 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 PFKLP17858 780 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 ITIH1P19827 911 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 MSH3P20585 1137 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 RXRGP48443 463 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 OCA2Q04671 838 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 ZNF691Q5VV52 312 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 LIX1Q8N485 282 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 IL17CQ9P0M4 197 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 DAPK2Q9UIK4 370 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 DHRS7Q9Y394 339 aa20.67■□□□□ 0.9
COL18A1-207ENST00000473212 C2orf78A6NCI8 922 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 OR6C75A6NL08 312 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 PGRP06401 933 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 FSHRP23945 695 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 SLC11A2P49281 568 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 FAM189BP81408 668 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 TOP3AQ13472 1001 aaPredicted RBP20.66■□□□□ 0.9
COL18A1-207ENST00000473212 SUSD1Q6UWL2 747 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 ADAMTSL2Q86TH1 951 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 ANKRD13BQ86YJ7 626 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 ADHFE1Q8IWW8 467 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 OR5K1Q8NHB7 308 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 WFDC5Q8TCV5 224 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 AASSQ9UDR5 926 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 KLQ9UEF7 1012 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 KRT87PA6NCN2 255 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 ARVCFO00192 962 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 UGT2B11O75310 529 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 SCELO95171 688 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 CD300CQ08708 224 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 ZNF846Q147U1 533 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 PERM1Q5SV97 790 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 MICU2Q8IYU8 434 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 SLC22A15Q8IZD6 547 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 TAMM41Q96BW9 452 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 SPATA17Q96L03 361 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 ALPK1Q96QP1 1244 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 GPR63Q9BZJ6 419 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 DCAF13Q9NV06 445 aaKnown RBP20.66■□□□□ 0.9
COL18A1-207ENST00000473212 FBXO10Q9UK96 956 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 CPQQ9Y646 472 aa20.66■□□□□ 0.9
COL18A1-207ENST00000473212 ZNF99A8MXY4 864 aaPredicted RBP20.65■□□□□ 0.9
COL18A1-207ENST00000473212 GAPDHSO14556 408 aaPredicted RBP20.65■□□□□ 0.9
COL18A1-207ENST00000473212 RGS14O43566 566 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 CREG1O75629 220 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 VAC14Q08AM6 782 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 LAPTM4AQ15012 233 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 RUNDC3AQ59EK9 446 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 DET1Q7L5Y6 550 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 SLCO6A1Q86UG4 719 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 SERPINA9Q86WD7 417 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 DCP2Q8IU60 420 aaKnown RBP20.65■□□□□ 0.9
COL18A1-207ENST00000473212 SNX29P2Q8IUI4 249 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 NETO1Q8TDF5 533 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 ADGRE3Q9BY15 652 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 TMEFF2Q9UIK5 374 aaPredicted RBP20.65■□□□□ 0.9
COL18A1-207ENST00000473212 KPNA4O00629 521 aaPredicted RBP20.65■□□□□ 0.9
COL18A1-207ENST00000473212 PRMT5O14744 637 aaPredicted RBP20.65■□□□□ 0.9
COL18A1-207ENST00000473212 AREL1O15033 823 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 RAD51BO15315 384 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 MITFO75030 526 aaPredicted RBP20.65■□□□□ 0.9
COL18A1-207ENST00000473212 CLDN11O75508 207 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 SERPINA1P01009 418 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms