RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 GGTA1PQ4G0N0 100 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 XKR7Q5GH72 579 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 METRNLQ641Q3 311 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 NXNQ6DKJ4 435 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 LETMD1Q6P1Q0 360 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 FAM83HQ6ZRV2 1179 aaPredicted RBP9.15□□□□□ -0.94
VPS52-216ENST00000471309 TREML1Q86YW5 311 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 TSTD1Q8NFU3 115 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 OR4F6Q8NGB9 312 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 KLHL29Q96CT2 875 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 SCARF2Q96GP6 870 aaPredicted RBP9.15□□□□□ -0.94
VPS52-216ENST00000471309 NSL1Q96IY1 281 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 PPP1R36Q96LQ0 422 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 MAGEB10Q96LZ2 347 aaPredicted RBP9.15□□□□□ -0.94
VPS52-216ENST00000471309 NELL2Q99435 816 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 NTMT1Q9BV86 223 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 TUBB1Q9H4B7 451 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 SLC32A1Q9H598 525 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 LMAN1LQ9HAT1 526 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 FZD3Q9NPG1 666 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 DNAJC11Q9NVH1 559 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 EBF1Q9UH73 591 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 TAGLN3Q9UI15 199 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 FBXL21Q9UKT6 434 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 CAPN7Q9Y6W3 813 aa9.15□□□□□ -0.94
VPS52-216ENST00000471309 ZFC3H1O60293 1989 aaKnown RBP9.14□□□□□ -0.95
VPS52-216ENST00000471309 PRR19A6NJB7 356 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 C19orf67A6NJJ6 358 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 TOR1BO14657 336 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 SLC31A1O15431 190 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 KCNJ13O60928 360 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 WDR47O94967 919 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 C1orf105O95561 183 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 RPN2P04844 631 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 CEACAM5P06731 702 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 CAPN1P07384 714 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 PRR35P0CG20 571 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 ESRRAP11474 423 aaPredicted RBP9.14□□□□□ -0.95
VPS52-216ENST00000471309 HGFP14210 728 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 EPORP19235 508 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 KELP23276 732 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 IMPA1P29218 277 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 ARL1P40616 181 aaPredicted RBP9.14□□□□□ -0.95
VPS52-216ENST00000471309 ATP4BP51164 291 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 CCR5P51681 352 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 PFN3P60673 137 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 KLF10Q13118 480 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 FZD5Q13467 585 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 SQLEQ14534 574 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 NFATC4Q14934 902 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 UBXN2BQ14CS0 331 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 NAA25Q14CX7 972 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 HERC3Q15034 1050 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 ZXDCQ2QGD7 858 aaPredicted RBP9.14□□□□□ -0.95
VPS52-216ENST00000471309 PTCHD3Q3KNS1 767 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 ANO7Q6IWH7 933 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 OGFOD2Q6N063 350 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 AGTRAPQ6RW13 159 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 LARP4Q71RC2 724 aaKnown RBP eCLIP9.14□□□□□ -0.95
VPS52-216ENST00000471309 MILR1Q7Z6M3 343 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 GALNT13Q8IUC8 556 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 DDIASQ8IXT1 998 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 PGBD3Q8N328 593 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 CDYL2Q8N8U2 506 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 FLCNQ8NFG4 579 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 CFAP61Q8NHU2 1237 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 MAGEC3Q8TD91 643 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 ATP6V1E2Q96A05 226 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 SLC7A6OSQ96CW6 309 aaPredicted RBP9.14□□□□□ -0.95
VPS52-216ENST00000471309 C3orf30Q96M34 536 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 CDK15Q96Q40 435 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 UHRF1Q96T88 793 aaPredicted RBP9.14□□□□□ -0.95
VPS52-216ENST00000471309 SLC29A3Q9BZD2 475 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 ZDHHC5Q9C0B5 715 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 RIC8BQ9NVN3 520 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 STOX2Q9P2F5 926 aaPredicted RBP9.14□□□□□ -0.95
VPS52-216ENST00000471309 SLC23A2Q9UGH3 650 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 POLG2Q9UHN1 485 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 ACSL5Q9ULC5 683 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 PRKAB1Q9Y478 270 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 TIMM22Q9Y584 194 aa9.14□□□□□ -0.95
VPS52-216ENST00000471309 C5orf42Q9H799 3197 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 ATP6AP2A0A1C7CYW4 349 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 UBDO15205 165 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 UGDHO60701 494 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 ATP6AP2O75787 350 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 CLDN9O95484 217 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 SLC16A8O95907 504 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 SLC35G4P0C7Q5 338 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 ACP5P13686 325 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 LBPP18428 481 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 PIK3R1P27986 724 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 PTPN4P29074 926 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 HMOX2P30519 316 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 AKT2P31751 481 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 NUDT1P36639 197 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 MNAT1P51948 309 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 YPEL5P62699 121 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 PCDH1Q08174 1060 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 GAS6Q14393 721 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms