RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 TSR3Q9UJK0 312 aaKnown RBP13.49□□□□□ -0.25
NPHP4-207ENST00000470763 NEU3Q9UQ49 428 aa13.49□□□□□ -0.25
NPHP4-207ENST00000470763 PRELID1Q9Y255 219 aa13.49□□□□□ -0.25
NPHP4-207ENST00000470763 DNAH12Q6ZR08 3092 aa13.49□□□□□ -0.25
NPHP4-207ENST00000470763 ERVH48-1M5A8F1 160 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 TFECO14948 347 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-207ENST00000470763 KERAO60938 352 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 CYP7B1O75881 506 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 RPS17P08708 135 aaKnown RBP13.48□□□□□ -0.25
NPHP4-207ENST00000470763 HOXA11P31270 313 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-207ENST00000470763 TUBA1BP68363 451 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 DSC2Q02487 901 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 SREBF2Q12772 1141 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 RFX4Q33E94 735 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 TBRG1Q3YBR2 411 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 Q5BKY6 102 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 IL27RAQ6UWB1 636 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 TUBA1AQ71U36 451 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 HIPK1Q86Z02 1210 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 C10orf111Q8N326 155 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 RHEBL1Q8TAI7 183 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 STAG3L4Q8TBR4 150 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 CEP295NLQ96MC4 621 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 PTPN18Q99952 460 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 UBQLN1Q9UMX0 589 aaKnown RBP13.48□□□□□ -0.25
NPHP4-207ENST00000470763 TIMM13Q9Y5L4 95 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-207ENST00000470763 SNX8Q9Y5X2 465 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 ARL5AQ9Y689 179 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 MKI67P46013 3256 aaKnown RBP13.48□□□□□ -0.25
NPHP4-207ENST00000470763 MICAL3Q7RTP6 2002 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 DOCK1Q14185 1865 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 SLC12A8A0AV02 714 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 KRT87PA6NCN2 255 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 EVPLLA8MZ36 301 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 M0R082 166 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 BTN3A1O00481 513 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 CREG1O75629 220 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 CTSKP43235 329 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 MAD2L1BPQ15013 274 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-207ENST00000470763 LRRC26Q2I0M4 334 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 OR8H2Q8N162 312 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 TTC29Q8NA56 475 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-207ENST00000470763 ZMIZ2Q8NF64 920 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 CHAC2Q8WUX2 184 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 MED30Q96HR3 178 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 MS4A4AQ96JQ5 239 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 OR51E2Q9H255 320 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 TFB2MQ9H5Q4 396 aaKnown RBP13.48□□□□□ -0.25
NPHP4-207ENST00000470763 PCTPQ9UKL6 214 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 PDCD11Q14690 1871 aaKnown RBP13.48□□□□□ -0.25
NPHP4-207ENST00000470763 SMIM28A0A1B0GU29 152 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 CD3EAPO15446 510 aaKnown RBP13.48□□□□□ -0.25
NPHP4-207ENST00000470763 GJB3O75712 270 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 RHOBTB1O94844 696 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 GLP2RO95838 553 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 RFTN2Q52LD8 501 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-207ENST00000470763 SPANXN2Q5MJ10 180 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 CPZQ66K79 652 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 CAPN13Q6MZZ7 669 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-207ENST00000470763 GPRIN3Q6ZVF9 776 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 IFNL1Q8IU54 200 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 CCDC71Q8IV32 467 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-207ENST00000470763 OR8J3Q8NGG0 315 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 OR13C4Q8NGS5 318 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 BLOC1S5Q8TDH9 187 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 CHCHD6Q9BRQ6 235 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 TAS2R9Q9NYW1 312 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 SLC25A37Q9NYZ2 338 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 ABCG2Q9UNQ0 655 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 KCNH4Q9UQ05 1017 aa13.48□□□□□ -0.25
NPHP4-207ENST00000470763 MN1Q10571 1320 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-207ENST00000470763 LOC105371267A0A1B0GV96 52 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 MANSC4A6NHS7 340 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-207ENST00000470763 SEMA3DO95025 777 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 MLYCDO95822 493 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 MOCS2O96007 188 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-207ENST00000470763 IFNA8P32881 189 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 PPP3CCP48454 512 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 GPLD1P80108 840 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 CREMQ03060 361 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 PRKCDQ05655 676 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 TP53BP2Q13625 1128 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 KCTD2Q14681 263 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 TIGD6Q17RP2 521 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 SMU1Q2TAY7 513 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 FAM174BQ3ZCQ3 159 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 ELMOD2Q8IZ81 293 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 KIAA1191Q96A73 305 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 KCNS3Q9BQ31 491 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 NUSAP1Q9BXS6 441 aaKnown RBP13.47□□□□□ -0.25
NPHP4-207ENST00000470763 MCOLN1Q9GZU1 580 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 RNF39Q9H2S5 420 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 CRTAC1Q9NQ79 661 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 DCAF13Q9NV06 445 aaKnown RBP13.47□□□□□ -0.25
NPHP4-207ENST00000470763 DERAQ9Y315 318 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 F9P00740 461 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 MSH3P20585 1137 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 SLC15A1P46059 708 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 LILRA4P59901 499 aa13.47□□□□□ -0.25
NPHP4-207ENST00000470763 CYP4F2P78329 520 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms