RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, human

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD3-208	ENST00000470045	RNF31	Q96EP0	1072 aa		13.62	□□□□□ -0.23
COMMD3-208	ENST00000470045	TRAPPC9	Q96Q05	1148 aa		13.62	□□□□□ -0.23
COMMD3-208	ENST00000470045	PANX3	Q96QZ0	392 aa		13.62	□□□□□ -0.23
COMMD3-208	ENST00000470045	MENT	Q9BUN1	341 aa		13.62	□□□□□ -0.23
COMMD3-208	ENST00000470045	SYTL2	Q9HCH5	934 aa		13.62	□□□□□ -0.23
COMMD3-208	ENST00000470045	XAB2	Q9HCS7	855 aa	Known RBP	13.62	□□□□□ -0.23
COMMD3-208	ENST00000470045	LHX9	Q9NQ69	397 aa		13.62	□□□□□ -0.23
COMMD3-208	ENST00000470045	KCND1	Q9NSA2	647 aa		13.62	□□□□□ -0.23
COMMD3-208	ENST00000470045	SOHLH2	Q9NX45	425 aa		13.62	□□□□□ -0.23
COMMD3-208	ENST00000470045	OR6C2	Q9NZP2	312 aa		13.62	□□□□□ -0.23
COMMD3-208	ENST00000470045	GNPTG	Q9UJJ9	305 aa		13.62	□□□□□ -0.23
COMMD3-208	ENST00000470045	CROT	Q9UKG9	612 aa		13.62	□□□□□ -0.23
COMMD3-208	ENST00000470045	PCDHGA6	Q9Y5G7	932 aa		13.62	□□□□□ -0.23
COMMD3-208	ENST00000470045	SPTB	P11277	2137 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	FAM237B	A0A1B0GVD1	139 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	NKX2-8	O15522	239 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	CPNE3	O75131	537 aa	Known RBP	13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	NDUFS3	O75489	264 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	APOA4	P06727	396 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	CHRM5	P08912	532 aa	Predicted RBP	13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	UGT2B7	P16662	529 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	OGN	P20774	298 aa	Known RBP	13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	OAS2	P29728	719 aa	Known RBP	13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	PKLR	P30613	574 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	DLST	P36957	453 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	ADAR	P55265	1226 aa	Known RBP	13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	MC1R	Q01726	317 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	HSPA14	Q0VDF9	509 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	GRB7	Q14451	532 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	GBX1	Q14549	363 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	ZNF789	Q5FWF6	425 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	CTSL3P	Q5NE16	218 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	RNF187	Q5TA31	235 aa	Predicted RBP	13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	MRNIP	Q6NTE8	343 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	BORA	Q6PGQ7	559 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	UNC5D	Q6UXZ4	953 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	ZNF517	Q6ZMY9	492 aa	Predicted RBP	13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	NAT8L	Q8N9F0	302 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	GRK7	Q8WTQ7	553 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	LPGAT1	Q92604	370 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	LRFN5	Q96NI6	719 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	BIRC8	Q96P09	236 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	SERPINB12	Q96P63	405 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	OR2A14	Q96R47	310 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	TCF12	Q99081	682 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	ARHGAP9	Q9BRR9	750 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	CHRNA10	Q9GZZ6	450 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	TRMT1	Q9NXH9	659 aa	Known RBP	13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	PADI1	Q9ULC6	663 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	PCDHB3	Q9Y5E6	796 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	MRPS18B	Q9Y676	258 aa	Known RBP	13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	HELZ2	Q9BYK8	2649 aa	Known RBP	13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	BOD1L1	Q8NFC6	3051 aa		13.61	□□□□□ -0.23
COMMD3-208	ENST00000470045	FER1L5	A0AVI2	2057 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	GOLGA6L10	A0A0M3HER8	536 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	USP27X	A6NNY8	438 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	C21orf140	B9A014	251 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	KPNA5	O15131	536 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	ZNF185	O15231	689 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	KDM1A	O60341	852 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	SCRG1	O75711	98 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	RECK	O95980	971 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	FAM87A	P0C7U9	286 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	PVR	P15151	417 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	TCP1	P17987	556 aa	Known RBP	13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	PEBP1	P30086	187 aa	Known RBP	13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	GABRA4	P48169	554 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	TERF1	P54274	439 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	CSE1L	P55060	971 aa	Known RBP	13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	ABR	Q12979	859 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	DNASE1L3	Q13609	305 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	TMED2	Q15363	201 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	KYNU	Q16719	465 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	PTRHD1	Q6GMV3	140 aa	Known RBP	13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	TMEM135	Q86UB9	458 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	TMEM126B	Q8IUX1	230 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	DCUN1D3	Q8IWE4	304 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	AGGF1	Q8N302	714 aa	eCLIP	13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	CT55	Q8WUE5	264 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	SLCO2A1	Q92959	643 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	TRIM56	Q9BRZ2	755 aa	Known RBP	13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	ADNP	Q9H2P0	1102 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	FANCE	Q9HB96	536 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	STARD5	Q9NSY2	213 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	SPHK1	Q9NYA1	384 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	KCND3	Q9UK17	655 aa		13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	TDRKH	Q9Y2W6	561 aa	Known RBP	13.6	□□□□□ -0.23
COMMD3-208	ENST00000470045	ZCWPW2	A0A1B0GU75	182 aa		13.59	□□□□□ -0.23
COMMD3-208	ENST00000470045	MAGEB16	A2A368	324 aa		13.59	□□□□□ -0.23
COMMD3-208	ENST00000470045	SDR42E2	A6NKP2	422 aa		13.59	□□□□□ -0.23
COMMD3-208	ENST00000470045	GOLGA8K	D6RF30	607 aa		13.59	□□□□□ -0.23
COMMD3-208	ENST00000470045		H3BMH7	237 aa		13.59	□□□□□ -0.23
COMMD3-208	ENST00000470045	GOLGA8T	H3BQL2	631 aa		13.59	□□□□□ -0.23
COMMD3-208	ENST00000470045	ESR1	P03372	595 aa		13.59	□□□□□ -0.23
COMMD3-208	ENST00000470045	NTRK1	P04629	796 aa		13.59	□□□□□ -0.23
COMMD3-208	ENST00000470045	RPN2	P04844	631 aa		13.59	□□□□□ -0.23
COMMD3-208	ENST00000470045	CCNYL3	P0C7X3	344 aa		13.59	□□□□□ -0.23
COMMD3-208	ENST00000470045	PRKAR1A	P10644	381 aa		13.59	□□□□□ -0.23
COMMD3-208	ENST00000470045	SFTPC	P11686	197 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms