RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ALS2CLQ60I27 953 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 ZNF776Q68DI1 518 aaPredicted RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 ERAP2Q6P179 960 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 CRTC1Q6UUV9 634 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 RFLNAQ6ZTI6 216 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 USP45Q70EL2 814 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 TRMT10CQ7L0Y3 403 aaKnown RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 PARS2Q7L3T8 475 aaKnown RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 TAS2R42Q7RTR8 314 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 TRMT11Q7Z4G4 463 aaKnown RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 PTAR1Q7Z6K3 402 aaPredicted RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 DSG4Q86SJ6 1040 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 LDB1Q86U70 411 aaPredicted RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 TSPAN33Q86UF1 283 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 TMPRSS6Q8IU80 811 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 UBALD2Q8IYN6 164 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 CMTM4Q8IZR5 234 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 DEFB119Q8N690 84 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 PPM1NQ8N819 430 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 PNPLA1Q8N8W4 532 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 EIF1ADQ8N9N8 165 aaKnown RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 KDM1BQ8NB78 822 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 TMIEQ8NEW7 156 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 OR4K2Q8NGD2 314 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 OR13C4Q8NGS5 318 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 OR2T3Q8NH03 318 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 GSDMBQ8TAX9 411 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 BRSK1Q8TDC3 778 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 HMGB4Q8WW32 186 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 ANKRD7Q92527 254 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 HOXB13Q92826 284 aaPredicted RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 KLK6Q92876 244 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 HDAC10Q969S8 669 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 TADA1Q96BN2 335 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 SIPA1Q96FS4 1042 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 MSANTD3Q96H12 275 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 PPP1R16AQ96I34 528 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 DNAJC1Q96KC8 554 aaKnown RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 C20orf173Q96LM9 149 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 TBATAQ96M53 351 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 ZNF778Q96MU6 729 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 ZNF641Q96N77 438 aaPredicted RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 TTC25Q96NG3 672 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 GNRHR2Q96P88 292 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 ZIM3Q96PE6 472 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 TRIB3Q96RU7 358 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 RUFY1Q96T51 708 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 CCDC77Q9BR77 488 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 WDR83Q9BRX9 315 aaKnown RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 WRAP53Q9BUR4 548 aaKnown RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 SSBP3Q9BWW4 388 aaPredicted RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 FAM129AQ9BZQ8 928 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 IL22Q9GZX6 179 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 PABPC3Q9H361 631 aaKnown RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 SUDS3Q9H7L9 328 aaPredicted RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 TBC1D17Q9HA65 648 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 LTB4R2Q9NPC1 389 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 FBXL12Q9NXK8 326 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 TBK1Q9UHD2 729 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 CD84Q9UIB8 345 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 ITM2BQ9Y287 266 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 NCKAP1Q9Y2A7 1128 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 ZNF711Q9Y462 761 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 TCAF1Q9Y4C2 921 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 TEX264Q9Y6I9 313 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 SLC30A1Q9Y6M5 507 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 MYO18AQ92614 2054 aaKnown RBP4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 ATG2BQ96BY7 2078 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 LAMA3Q16787 3333 aa4.05□□□□□ -1.76
TMEM39A-204ENST00000468545 BRWD1Q9NSI6 2320 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TRANK1O15050 2925 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TBC1D3DA0A087WVF3 549 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TBC1D3IA0A087WXS9 549 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TBC1D3EA0A087X179 549 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TBC1D3KA0A087X1G2 549 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 CXorf51AA0A1B0GTR3 108 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 FAM237BA0A1B0GVD1 139 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 EXOC1LA0A1B0GW35 172 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 A0A1W2PQ67 120 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 A0A1W2PQF6 199 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TCRBV9S1A1TA0A576 114 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 CCDC162PA2VCL2 907 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TBC1D3FA6NER0 549 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 NPIPB15A6NHN6 443 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 CXorf49A8MYA2 514 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 TBC1D3LB9A6J9 549 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 E7ESA3 106 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 LDB2O43679 373 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 PI15O43692 258 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 UGT1A9O60656 530 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 ATG13O75143 517 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 ITGA10O75578 1167 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 RPP40O75818 363 aaKnown RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 FAM155BO75949 473 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 USP1O94782 785 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 GOT2P00505 430 aaKnown RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 PDGFBP01127 241 aaPredicted RBP4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 GASTP01350 101 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms