RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 IKZF3Q9UKT9 509 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 RAB23Q9ULC3 237 aa6.71□□□□□ -1.34
SCAF4-204ENST00000467731 SMG5Q9UPR3 1016 aaKnown RBP6.71□□□□□ -1.34
SCAF4-204ENST00000467731 RIF1Q5UIP0 2472 aaKnown RBP6.71□□□□□ -1.34
SCAF4-204ENST00000467731 TMEM120BA0PK00 339 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 DYTNA2CJ06 578 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 TK2O00142 265 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 BTN3A1O00481 513 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 MGRN1O60291 552 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 SDC3O75056 442 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 COL6A2P12110 1019 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 TFEBP19484 476 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 HNRNPKP61978 463 aaKnown RBP eCLIP6.7□□□□□ -1.34
SCAF4-204ENST00000467731 PLOD1Q02809 727 aaPredicted RBP6.7□□□□□ -1.34
SCAF4-204ENST00000467731 GRIK2Q13002 908 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 BLMHQ13867 455 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 MPP2Q14168 576 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 TRIM61Q5EBN2 209 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 N4BP2L1Q5TBK1 243 aaPredicted RBP6.7□□□□□ -1.34
SCAF4-204ENST00000467731 C16orf46Q6P387 395 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 CYHR1Q6ZMK1 362 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 SLC7A5P1Q8MH63 180 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 FSTL5Q8N475 847 aaPredicted RBP6.7□□□□□ -1.34
SCAF4-204ENST00000467731 SREK1Q8WXA9 508 aaKnown RBP6.7□□□□□ -1.34
SCAF4-204ENST00000467731 PDLIM5Q96HC4 596 aaKnown RBP6.7□□□□□ -1.34
SCAF4-204ENST00000467731 MPP4Q96JB8 637 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 TSNARE1Q96NA8 513 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 PRRX2Q99811 253 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 SMOC1Q9H4F8 434 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 ALG9Q9H6U8 611 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 CAPN10Q9HC96 672 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 SLC40A1Q9NP59 571 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 PRDM8Q9NQV8 689 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 TBC1D29Q9UFV1 150 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 TMCO1Q9UM00 188 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 PRELID1Q9Y255 219 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 PCM1Q15154 2024 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 CFAP54Q96N23 3096 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 NPEPPSL1A6NEC2 478 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 CDC7O00311 574 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 PRPF4O43172 522 aaKnown RBP eCLIP6.7□□□□□ -1.34
SCAF4-204ENST00000467731 SNX2O60749 519 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 KCNJ13O60928 360 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 EPN2O95208 641 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 EML2O95834 649 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 GSTA1P08263 222 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 CCDC159P0C7I6 412 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 IDSP22304 550 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 MPLP40238 635 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 DPP6P42658 865 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 CLCNKAP51800 687 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 IRX4P78413 519 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 ABRQ12979 859 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 RPA4Q13156 261 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 ACAP2Q15057 778 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 TSNQ15631 228 aaKnown RBP6.7□□□□□ -1.34
SCAF4-204ENST00000467731 LRRC8EQ6NSJ5 796 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 KLC3Q6P597 504 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 SLC23A3Q6PIS1 610 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 ISCA2Q86U28 154 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 CFAP61Q8NHU2 1237 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 CEP76Q8TAP6 659 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 GPBAR1Q8TDU6 330 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 DLG3Q92796 817 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 LOXL4Q96JB6 756 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 FAM111AQ96PZ2 611 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 ELF4Q99607 663 aaPredicted RBP6.7□□□□□ -1.34
SCAF4-204ENST00000467731 SELENOSQ9BQE4 189 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 ERVMER34-1Q9H9K5 563 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 NMRAL1Q9HBL8 299 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 SSU72Q9NP77 194 aaKnown RBP6.7□□□□□ -1.34
SCAF4-204ENST00000467731 SLC17A7Q9P2U7 560 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 XPR1Q9UBH6 696 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 ADAMTS6Q9UKP5 1117 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 EMCNQ9ULC0 261 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 ACSL5Q9ULC5 683 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 GRID1Q9ULK0 1009 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 PLLPQ9Y342 182 aa6.7□□□□□ -1.34
SCAF4-204ENST00000467731 CFAP20Q9Y6A4 193 aaKnown RBP6.7□□□□□ -1.34
SCAF4-204ENST00000467731 ASCC3Q8N3C0 2202 aaKnown RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 PDZK1P1A8MUH7 402 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 DLL1O00548 723 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 MATN4O95460 622 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 SLC35G4P0C7Q5 338 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 NR1D1P20393 614 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 KCNC1P48547 511 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 ATP6V0D1P61421 351 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 PPP2R2AP63151 447 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 OR4D1Q15615 310 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 LVRNQ6Q4G3 990 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 SBSNQ6UWP8 590 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 NEK10Q6ZWH5 1172 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 RABEPKQ7Z6M1 372 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 TAF8Q7Z7C8 310 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 PDZD3Q86UT5 571 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 TMEM151AQ8N4L1 468 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 ZNF548Q8NEK5 533 aaPredicted RBP6.69□□□□□ -1.34
SCAF4-204ENST00000467731 LMX1AQ8TE12 382 aa6.69□□□□□ -1.34
SCAF4-204ENST00000467731 KIAA1191Q96A73 305 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms