RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 ZNF669Q96BR6 464 aaPredicted RBP13.66□□□□□ -0.22
CCHCR1-211ENST00000467553 SLC41A2Q96JW4 573 aa13.66□□□□□ -0.22
CCHCR1-211ENST00000467553 SIGLEC10Q96LC7 697 aa13.66□□□□□ -0.22
CCHCR1-211ENST00000467553 RUNDC3BQ96NL0 473 aa13.66□□□□□ -0.22
CCHCR1-211ENST00000467553 KRT12Q99456 494 aa13.66□□□□□ -0.22
CCHCR1-211ENST00000467553 KIR3DX1Q9H7L2 352 aa13.66□□□□□ -0.22
CCHCR1-211ENST00000467553 IL1RAPL1Q9NZN1 696 aa13.66□□□□□ -0.22
CCHCR1-211ENST00000467553 POLHQ9Y253 713 aa13.66□□□□□ -0.22
CCHCR1-211ENST00000467553 ASF1AQ9Y294 204 aa13.66□□□□□ -0.22
CCHCR1-211ENST00000467553 FLNCQ14315 2725 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 PFDN6O15212 129 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 TTI1O43156 1089 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 KIAA0754O94854 1291 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 PRKAR1AP10644 381 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 POLR2CP19387 275 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 OAS2P29728 719 aaKnown RBP13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 FMO4P31512 558 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 CCR7P32248 378 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 ARCN1P48444 511 aaKnown RBP13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 PPP1CAP62136 330 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 ETF1P62495 437 aaKnown RBP13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 PLOD1Q02809 727 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 HSPA14Q0VDF9 509 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 DEFB109BQ30KR1 87 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 NEPROQ6NW34 567 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 SYDE1Q6ZW31 735 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 OOSP2Q86WS3 158 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 UNC5BQ8IZJ1 945 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 SIDT2Q8NBJ9 832 aaKnown RBP13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 ACVR1CQ8NER5 493 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 OR8K5Q8NH50 307 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 LCN9Q8WX39 176 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 NRTNQ99748 197 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 TRIM51Q9BSJ1 452 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 GPR87Q9BY21 358 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 TRIM31Q9BZY9 425 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 TRIM4Q9C037 500 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 SRMSQ9H3Y6 488 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 MVB12BQ9H7P6 319 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 GNPTGQ9UJJ9 305 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 CROTQ9UKG9 612 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 RARRES3Q9UL19 164 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 CRYL1Q9Y2S2 319 aa13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 TDRKHQ9Y2W6 561 aaKnown RBP13.65□□□□□ -0.22
CCHCR1-211ENST00000467553 OR5K3A6NET4 321 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 BHMG1C9JSJ3 638 aaPredicted RBP13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 MKRN2OSH3BPM6 223 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 APOA4P06727 396 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 IVDP26440 423 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 ACADLP28330 430 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 MAGEA3P43357 314 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 SH3BP2P78314 561 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 ABRQ12979 859 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 PRKAA1Q13131 559 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 LACTB2Q53H82 288 aaPredicted RBP13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 ARMC3Q5W041 872 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 TCTN3Q6NUS6 607 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 C16orf46Q6P387 395 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 TMEM135Q86UB9 458 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 LRRC6Q86X45 466 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 AGGF1Q8N302 714 aaeCLIP13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 GALNT6Q8NCL4 622 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 OR52E1Q8NGJ3 308 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 OR5AR1Q8NGP9 310 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 CFAP61Q8NHU2 1237 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 ASZ1Q8WWH4 475 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 ABHD17AQ96GS6 310 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 PANX3Q96QZ0 392 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 TCF12Q99081 682 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 MAP3K3Q99759 626 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 HGH1Q9BTY7 390 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 P2RY12Q9H244 342 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 XKR8Q9H6D3 395 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 LHX9Q9NQ69 397 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 C20orf96Q9NUD7 363 aaPredicted RBP13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 KCNMB2Q9Y691 235 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 MAST4O15021 2626 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 HECTD1Q9ULT8 2610 aa13.64□□□□□ -0.23
CCHCR1-211ENST00000467553 IGHV5-51A0A0C4DH38 117 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 ZCWPW2A0A1B0GU75 182 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 GSAPA4D1B5 854 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 TLCD2A6NGC4 264 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 PYCARD-AS1I3L0S3 204 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 MATN2O00339 956 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 BANF1O75531 89 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 USP1O94782 785 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 ZNF28P17035 718 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 CHRM3P20309 590 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 RPS3P23396 243 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 F8A1P23610 371 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 AOAHP28039 575 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 ARL4DP49703 201 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 HSD11B2P80365 405 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 MRPS25P82663 173 aaKnown RBP13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 DHX9Q08211 1270 aaKnown RBP13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 KLRB1Q12918 225 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 CTBP1Q13363 440 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 TUBB3Q13509 450 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 LONRF1Q17RB8 773 aa13.63□□□□□ -0.23
CCHCR1-211ENST00000467553 BBS9Q3SYG4 887 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms