RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 CCDC137Q6PK04 289 aaKnown RBP21.08■□□□□ 0.97
LIME1-203ENST00000465591 SPESP1Q6UW49 350 aa21.08■□□□□ 0.97
LIME1-203ENST00000465591 ZNF605Q86T29 641 aa21.08■□□□□ 0.97
LIME1-203ENST00000465591 LMNTD1Q8N9Z9 388 aa21.08■□□□□ 0.97
LIME1-203ENST00000465591 OR1L3Q8NH93 324 aa21.08■□□□□ 0.97
LIME1-203ENST00000465591 OR2A14Q96R47 310 aa21.08■□□□□ 0.97
LIME1-203ENST00000465591 CIDEBQ9UHD4 219 aa21.08■□□□□ 0.97
LIME1-203ENST00000465591 PIPSLA2A3N6 862 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 B8ZZF3 427 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 PGRMC1O00264 195 aaKnown RBP21.07■□□□□ 0.96
LIME1-203ENST00000465591 KATNA1O75449 491 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 SCRG1O75711 98 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 CHRM5P08912 532 aaPredicted RBP21.07■□□□□ 0.96
LIME1-203ENST00000465591 CCNYL3P0C7X3 344 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 TCN2P20062 427 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 SHMT2P34897 504 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 NFKB2Q00653 900 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 NFATC3Q12968 1075 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 GPS2Q13227 327 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 GRB7Q14451 532 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 ZIC1Q15915 447 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 DEFB109BQ30KR1 87 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 CTSL3PQ5NE16 218 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 TMEM126BQ8IUX1 230 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 MENTQ9BUN1 341 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 FAM60AQ9NP50 221 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 LATS2Q9NRM7 1088 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 STARD5Q9NSY2 213 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 IL1RAPL1Q9NZN1 696 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 POLG2Q9UHN1 485 aa21.07■□□□□ 0.96
LIME1-203ENST00000465591 USP27XA6NNY8 438 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 GOLGA8MH3BSY2 632 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 HCRTR1O43613 425 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 NDUFS3O75489 264 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 SLCO2B1O94956 709 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 MT-ND3P03897 115 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 F7P08709 466 aaPredicted RBP21.06■□□□□ 0.96
LIME1-203ENST00000465591 RPS3P23396 243 aaKnown RBP eCLIP21.06■□□□□ 0.96
LIME1-203ENST00000465591 POLE2P56282 527 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 CRTC2Q53ET0 693 aaPredicted RBP21.06■□□□□ 0.96
LIME1-203ENST00000465591 DNAJC21Q5F1R6 531 aaKnown RBP21.06■□□□□ 0.96
LIME1-203ENST00000465591 PTRHD1Q6GMV3 140 aaKnown RBP21.06■□□□□ 0.96
LIME1-203ENST00000465591 LCN10Q6JVE6 187 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 CDHR3Q6ZTQ4 885 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 TMEM135Q86UB9 458 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 AGGF1Q8N302 714 aaeCLIP21.06■□□□□ 0.96
LIME1-203ENST00000465591 OTUD6BQ8N6M0 293 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 OR8K5Q8NH50 307 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 CFAP61Q8NHU2 1237 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 ACTRT1Q8TDG2 376 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 ASZ1Q8WWH4 475 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 LPGAT1Q92604 370 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 BIRC8Q96P09 236 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 CATSPER2Q96P56 530 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 GEMIN8Q9NWZ8 242 aaKnown RBP21.06■□□□□ 0.96
LIME1-203ENST00000465591 PCDHGA6Q9Y5G7 932 aa21.06■□□□□ 0.96
LIME1-203ENST00000465591 MED13Q9UHV7 2174 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 TMEM150CB9EJG8 249 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 F8W8V4 182 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 ZSCAN12O43309 604 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 CPNE3O75131 537 aaKnown RBP21.05■□□□□ 0.96
LIME1-203ENST00000465591 PHF2O75151 1096 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 APOA4P06727 396 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 PKLRP30613 574 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 EIF3BP55884 814 aaKnown RBP21.05■□□□□ 0.96
LIME1-203ENST00000465591 RPS18P62269 152 aaKnown RBP21.05■□□□□ 0.96
LIME1-203ENST00000465591 MC1RQ01726 317 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 ERV3-1Q14264 604 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 TYSND1Q2T9J0 566 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 KIAA0930Q6ICG6 404 aaPredicted RBP21.05■□□□□ 0.96
LIME1-203ENST00000465591 FAM20CQ8IXL6 584 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 LINC01555Q8NAE3 123 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 PDLIM2Q96JY6 352 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 IL17FQ96PD4 163 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 TSSK1BQ9BXA7 367 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 OR6C2Q9NZP2 312 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 GNPTGQ9UJJ9 305 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 SNX12Q9UMY4 172 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 RUVBL2Q9Y230 463 aaKnown RBP21.05■□□□□ 0.96
LIME1-203ENST00000465591 CCDC88CQ9P219 2028 aa21.05■□□□□ 0.96
LIME1-203ENST00000465591 CTSBP07858 339 aa21.04■□□□□ 0.96
LIME1-203ENST00000465591 MSL3P1P0C860 447 aa21.04■□□□□ 0.96
LIME1-203ENST00000465591 CCR10P46092 362 aa21.04■□□□□ 0.96
LIME1-203ENST00000465591 GABRA4P48169 554 aa21.04■□□□□ 0.96
LIME1-203ENST00000465591 KYNUQ16719 465 aa21.04■□□□□ 0.96
LIME1-203ENST00000465591 PLEKHS1Q5SXH7 462 aa21.04■□□□□ 0.96
LIME1-203ENST00000465591 ZNF517Q6ZMY9 492 aaPredicted RBP21.04■□□□□ 0.96
LIME1-203ENST00000465591 SPNS2Q8IVW8 549 aa21.04■□□□□ 0.96
LIME1-203ENST00000465591 C19orf47Q8N9M1 422 aaKnown RBP21.04■□□□□ 0.96
LIME1-203ENST00000465591 MCUQ8NE86 351 aa21.04■□□□□ 0.96
LIME1-203ENST00000465591 SERPINB12Q96P63 405 aa21.04■□□□□ 0.96
LIME1-203ENST00000465591 NAP1L3Q99457 506 aaPredicted RBP21.04■□□□□ 0.96
LIME1-203ENST00000465591 ACTL8Q9H568 366 aa21.04■□□□□ 0.96
LIME1-203ENST00000465591 KCND3Q9UK17 655 aa21.04■□□□□ 0.96
LIME1-203ENST00000465591 PCDHB3Q9Y5E6 796 aa21.04■□□□□ 0.96
LIME1-203ENST00000465591 NFS1Q9Y697 457 aa21.04■□□□□ 0.96
LIME1-203ENST00000465591 KRT87PA6NCN2 255 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 C21orf140B9A014 251 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 NIPSNAP2O75323 286 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 CREG1O75629 220 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms