RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 RDH12Q96NR8 316 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 TUBA1CQ9BQE3 449 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 SLC29A3Q9BZD2 475 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 TOR3AQ9H497 397 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 CARS2Q9HA77 564 aaKnown RBP17.92■□□□□ 0.46
SYNE4-204ENST00000465425 ASIC5Q9NY37 505 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 SLC25A37Q9NYZ2 338 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 H0Y858 1186 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 GREM1O60565 184 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 PFDN1O60925 122 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 SCELO95171 688 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 ATE1O95260 518 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 CBSLP0DN79 551 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 CBSP35520 551 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 CSNK1DP48730 415 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 FAM43BQ6ZT52 329 aaPredicted RBP17.92■□□□□ 0.46
SYNE4-204ENST00000465425 DEFB128Q7Z7B8 93 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 METTL3Q86U44 580 aaKnown RBP17.92■□□□□ 0.46
SYNE4-204ENST00000465425 CBARPQ8N350 705 aaPredicted RBP17.92■□□□□ 0.46
SYNE4-204ENST00000465425 ZNF555Q8NEP9 628 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 SKA2Q8WVK7 121 aaPredicted RBP17.92■□□□□ 0.46
SYNE4-204ENST00000465425 TLR9Q9NR96 1032 aa17.92■□□□□ 0.46
SYNE4-204ENST00000465425 A0A0J9YVX5 310 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 PABPN1LA6NDY0 278 aaKnown RBP17.91■□□□□ 0.46
SYNE4-204ENST00000465425 B4GAT1O43505 415 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 PQBP1O60828 265 aaKnown RBP17.91■□□□□ 0.46
SYNE4-204ENST00000465425 BCKDHAP12694 445 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 GALK1P51570 392 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 IST1P53990 364 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 USP39Q53GS9 565 aaKnown RBP17.91■□□□□ 0.46
SYNE4-204ENST00000465425 RUNDC3AQ59EK9 446 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 BROXQ5VW32 411 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 CROCCP3Q8IVE0 287 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 MSRB3Q8IXL7 192 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 SVOPLQ8N434 492 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 DNAJB8Q8NHS0 232 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 TMEM169Q96HH4 297 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 DOK1Q99704 481 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 SLC32A1Q9H598 525 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 HPS4Q9NQG7 708 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 CDH7Q9ULB5 785 aa17.91■□□□□ 0.46
SYNE4-204ENST00000465425 NPIPB15A6NHN6 443 aaPredicted RBP17.9■□□□□ 0.46
SYNE4-204ENST00000465425 GFRA2O00451 464 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 BNIP3LO60238 219 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 PRKD3O94806 890 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 SHMT2P34897 504 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 RANBP1P43487 201 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 RPS14P62263 151 aaKnown RBP17.9■□□□□ 0.46
SYNE4-204ENST00000465425 SEMG2Q02383 582 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 FKBP9P1Q75LS8 142 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 MICU2Q8IYU8 434 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 PHACTR4Q8IZ21 702 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 GPR26Q8NDV2 337 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 SELENOMQ8WWX9 145 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 NRBF2Q96F24 287 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 COPS8Q99627 209 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 RBM4BQ9BQ04 359 aaKnown RBP17.9■□□□□ 0.46
SYNE4-204ENST00000465425 RBM4Q9BWF3 364 aaKnown RBP17.9■□□□□ 0.46
SYNE4-204ENST00000465425 CKMP06732 381 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 TMED1Q13445 227 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 LAPTM5Q13571 262 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 NKG7Q16617 165 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 GTDC1Q4AE62 458 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 SPESP1Q6UW49 350 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 ADHFE1Q8IWW8 467 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 TMEM132CQ8N3T6 1108 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 OR2AP1Q8NGE2 309 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 FAM120BQ96EK7 910 aaKnown RBP17.9■□□□□ 0.46
SYNE4-204ENST00000465425 ACPTQ9BZG2 426 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 ABCG8Q9H221 673 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 ELOVL6Q9H5J4 265 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 KAT8Q9H7Z6 458 aaKnown RBP17.9■□□□□ 0.46
SYNE4-204ENST00000465425 RMND5AQ9H871 391 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 SMURF2Q9HAU4 748 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 PLGRKTQ9HBL7 147 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 ZNF334Q9HCZ1 680 aaPredicted RBP17.9■□□□□ 0.46
SYNE4-204ENST00000465425 ZDHHC3Q9NYG2 299 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 KIAA1522Q9P206 1035 aaPredicted RBP17.9■□□□□ 0.46
SYNE4-204ENST00000465425 PCDHB14Q9Y5E9 798 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 INSL5Q9Y5Q6 135 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 PLXNA4Q9HCM2 1894 aa17.9■□□□□ 0.46
SYNE4-204ENST00000465425 NOBOXO60393 691 aa17.89■□□□□ 0.46
SYNE4-204ENST00000465425 AOC2O75106 756 aa17.89■□□□□ 0.46
SYNE4-204ENST00000465425 ERN1O75460 977 aaKnown RBP17.89■□□□□ 0.46
SYNE4-204ENST00000465425 E2F6O75461 281 aa17.89■□□□□ 0.46
SYNE4-204ENST00000465425 CPNE6O95741 557 aa17.89■□□□□ 0.46
SYNE4-204ENST00000465425 PDYNP01213 254 aa17.89■□□□□ 0.46
SYNE4-204ENST00000465425 RETP07949 1114 aa17.89■□□□□ 0.46
SYNE4-204ENST00000465425 LMAN2Q12907 356 aa17.89■□□□□ 0.46
SYNE4-204ENST00000465425 NOGQ13253 232 aa17.89■□□□□ 0.46
SYNE4-204ENST00000465425 RBM48Q5RL73 367 aaKnown RBP17.89■□□□□ 0.46
SYNE4-204ENST00000465425 ATG9BQ674R7 924 aa17.89■□□□□ 0.46
SYNE4-204ENST00000465425 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.89■□□□□ 0.46
SYNE4-204ENST00000465425 ZSWIM9Q86XI8 627 aa17.89■□□□□ 0.46
SYNE4-204ENST00000465425 EID3Q8N140 333 aa17.89■□□□□ 0.46
SYNE4-204ENST00000465425 OR52E4Q8NGH9 312 aa17.89■□□□□ 0.46
SYNE4-204ENST00000465425 LZICQ8WZA0 190 aa17.89■□□□□ 0.46
SYNE4-204ENST00000465425 OSBPL10Q9BXB5 764 aa17.89■□□□□ 0.46
SYNE4-204ENST00000465425 FANCEQ9HB96 536 aa17.89■□□□□ 0.46
SYNE4-204ENST00000465425 ABCB8Q9NUT2 735 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms