RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	MYF6	P23409	242 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CHM	P24386	653 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CCNC	P24863	283 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ARL1	P40616	181 aa	Predicted RBP	4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ZNF131	P52739	623 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	DCAF7	P61962	342 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	PSMC6	P62333	389 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	OLR1	P78380	273 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ABAT	P80404	500 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CBX1	P83916	185 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	BEX3	Q00994	111 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CEBPZ	Q03701	1054 aa	Known RBP	4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CTTN	Q14247	550 aa	Known RBP	4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	TWIST1	Q15672	202 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CCDC122	Q5T0U0	273 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CYP20A1	Q6UW02	462 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	PATL1	Q86TB9	770 aa	Known RBP	4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CCDC13	Q8IYE1	715 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	TMEM163	Q8TC26	289 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	SCARB1	Q8WTV0	552 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	P2RX5	Q93086	422 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	FBXL8	Q96CD0	374 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	GSDMA	Q96QA5	445 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ITPA	Q9BY32	194 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	EBF3	Q9H4W6	596 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	RPAP3	Q9H6T3	665 aa	Predicted RBP	4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	TLE6	Q9H808	572 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CLK4	Q9HAZ1	481 aa	Known RBP	4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	SCPEP1	Q9HB40	452 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	DDX4	Q9NQI0	724 aa	Known RBP	4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	SEPT11	Q9NVA2	429 aa	Known RBP	4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	PLK2	Q9NYY3	685 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ZMAT5	Q9UDW3	170 aa	Known RBP	4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	LIMA1	Q9UHB6	759 aa	Known RBP	4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CORO1C	Q9ULV4	474 aa	Predicted RBP	4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CEPT1	Q9Y6K0	416 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	LAMA4	Q16363	1823 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CKAP5	Q14008	2032 aa		4.99	□□□□□ -1.61
CACNA1C-223	ENST00000465278	APC	P25054	2843 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	FOCAD	Q5VW36	1801 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278		A0A1B0GVM2	712 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	MYMK	A6NI61	221 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	PDLIM1	O00151	329 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	HIP1	O00291	1037 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	VWA5A	O00534	786 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ASAP2	O43150	1006 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	DOK2	O60496	412 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	TIPRL	O75663	272 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	BMP15	O95972	392 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	TPM1	P09493	284 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	AGA	P20933	346 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ARRB2	P32121	409 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	HSPA4	P34932	840 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	PIK3CA	P42336	1068 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	MTHFR	P42898	656 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	GABRB2	P47870	512 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	RFX2	P48378	723 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	TIMM10	P62072	90 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ADORA2A-AS1	P86434	159 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	COX10	Q12887	443 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	DRAP1	Q14919	205 aa	Predicted RBP	4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	KBTBD12	Q3ZCT8	623 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	DCAF6	Q58WW2	860 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	DCLRE1A	Q6PJP8	1040 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	IKBIP	Q70UQ0	350 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	GSTA5	Q7RTV2	222 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	SLC35F3	Q8IY50	421 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ZBTB2	Q8N680	514 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	PRR26	Q8N8Z3	221 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	KBTBD3	Q8NAB2	608 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	TMEM116	Q8NCL8	245 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	HUS1B	Q8NHY5	278 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ERMN	Q8TAM6	284 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	AFAP1L1	Q8TED9	768 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	JAKMIP2	Q96AA8	810 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ZBTB9	Q96C00	473 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	CCDC34	Q96HJ3	373 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	TRIM6	Q9C030	488 aa	Predicted RBP	4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	LSG1	Q9H089	658 aa	Known RBP	4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	GRPEL1	Q9HAV7	217 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	EIF2B3	Q9NR50	452 aa	Known RBP	4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	HIF1AN	Q9NWT6	349 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	IL20	Q9NYY1	176 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	OR6C3	Q9NZP0	311 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	C6orf203	Q9P0P8	240 aa	Predicted RBP	4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	SPATA7	Q9P0W8	599 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	XPO7	Q9UIA9	1087 aa	Known RBP	4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	RCOR1	Q9UKL0	485 aa		4.98	□□□□□ -1.61
CACNA1C-223	ENST00000465278	ASTN1	O14525	1302 aa		4.97	□□□□□ -1.61
CACNA1C-223	ENST00000465278	PDS5A	Q29RF7	1337 aa	Known RBP	4.97	□□□□□ -1.61
CACNA1C-223	ENST00000465278	PDCD11	Q14690	1871 aa	Known RBP	4.97	□□□□□ -1.61
CACNA1C-223	ENST00000465278	SPAAR	A0A1B0GVQ0	90 aa		4.97	□□□□□ -1.61
CACNA1C-223	ENST00000465278	KANSL1L	A0AUZ9	987 aa		4.97	□□□□□ -1.61
CACNA1C-223	ENST00000465278	NKX2-2	O95096	273 aa		4.97	□□□□□ -1.61
CACNA1C-223	ENST00000465278	SMC2	O95347	1197 aa		4.97	□□□□□ -1.61
CACNA1C-223	ENST00000465278	VNN2	O95498	520 aa		4.97	□□□□□ -1.61
CACNA1C-223	ENST00000465278	MLYCD	O95822	493 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms