RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 CCDC114Q96M63 670 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 ACOX2Q99424 681 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 NAA11Q9BSU3 229 aaPredicted RBP3.84□□□□□ -1.79
ITGB1-208ENST00000464001 C1orf21Q9H246 121 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 ASAH2Q9NR71 780 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 SLC6A13Q9NSD5 602 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 GIMAP4Q9NUV9 329 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 CHCHD3Q9NX63 227 aaKnown RBP3.84□□□□□ -1.79
ITGB1-208ENST00000464001 FETUBQ9UGM5 382 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 HAO1Q9UJM8 370 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 LAMP5Q9UJQ1 280 aa3.84□□□□□ -1.79
ITGB1-208ENST00000464001 CPSF3Q9UKF6 684 aaKnown RBP3.84□□□□□ -1.79
ITGB1-208ENST00000464001 A0A1W2PQM1 296 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 A0A1W2PRV1 198 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 TMEM110-MUSTN1A8MSY1 372 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 CTDSP2O14595 271 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 ZBTB43O43298 467 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 PDE9AO76083 593 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 SEC31AO94979 1220 aaKnown RBP3.83□□□□□ -1.8
ITGB1-208ENST00000464001 SNX4O95219 450 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 BAG4O95429 457 aaKnown RBP3.83□□□□□ -1.8
ITGB1-208ENST00000464001 HEXBP07686 556 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 PBLDP30039 288 aaPredicted RBP3.83□□□□□ -1.8
ITGB1-208ENST00000464001 HOXC8P31273 242 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 CASQ1P31415 396 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 ARFIP1P53367 373 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 CLDN20P56880 219 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 STARD6P59095 220 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 COG7P83436 770 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 MRPL28Q13084 256 aaKnown RBP3.83□□□□□ -1.8
ITGB1-208ENST00000464001 IFT88Q13099 833 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 AIMP2Q13155 320 aaKnown RBP3.83□□□□□ -1.8
ITGB1-208ENST00000464001 RPA4Q13156 261 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 NTRK2Q16620 822 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 ZRANB3Q5FWF4 1079 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 ISLR2Q6UXK2 745 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 RBMS3Q6XE24 437 aaKnown RBP3.83□□□□□ -1.8
ITGB1-208ENST00000464001 STXBP4Q6ZWJ1 553 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 DPPA4Q7L190 304 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 GSTA5Q7RTV2 222 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 OTOAQ7RTW8 1153 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 PEX5LQ8IYB4 626 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 SYT2Q8N9I0 419 aaPredicted RBP3.83□□□□□ -1.8
ITGB1-208ENST00000464001 RDM1Q8NG50 284 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 PRPF31Q8WWY3 499 aaKnown RBP3.83□□□□□ -1.8
ITGB1-208ENST00000464001 FAM162AQ96A26 154 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 ABHD8Q96I13 439 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 VPS39Q96JC1 886 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 RAB3IPQ96QF0 476 aaPredicted RBP3.83□□□□□ -1.8
ITGB1-208ENST00000464001 PRAM1Q96QH2 718 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 BICC1Q9H694 974 aaKnown RBP3.83□□□□□ -1.8
ITGB1-208ENST00000464001 POLR1BQ9H9Y6 1135 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.83□□□□□ -1.8
ITGB1-208ENST00000464001 NINJ2Q9NZG7 142 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 EHD2Q9NZN4 543 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 ACTR3BQ9P1U1 418 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 PCDHGA5Q9Y5G8 931 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 PCDHGA1Q9Y5H4 931 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 AP1M2Q9Y6Q5 423 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 KIAA1210Q9ULL0 1709 aa3.83□□□□□ -1.8
ITGB1-208ENST00000464001 A0A1W2PPI3 338 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 OR2A25A4D2G3 310 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 OR5K3A6NET4 321 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 SERINC4A6NH21 518 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 GLOD5A6NK44 160 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 ZNF263O14978 683 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 LDLRAD4O15165 306 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 CLIC2O15247 247 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 BCAS2O75934 225 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-208ENST00000464001 REC8O95072 547 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 FDPSP14324 419 aaKnown RBP3.82□□□□□ -1.8
ITGB1-208ENST00000464001 RPS2P15880 293 aaKnown RBP3.82□□□□□ -1.8
ITGB1-208ENST00000464001 GNB3P16520 340 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 ZNF182P17025 639 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-208ENST00000464001 UGT1A1P22309 533 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 APOBEC1P41238 236 aaKnown RBP3.82□□□□□ -1.8
ITGB1-208ENST00000464001 NR2C2P49116 596 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 LMAN1P49257 510 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 NPY4RP50391 375 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 MRPL12P52815 198 aaKnown RBP3.82□□□□□ -1.8
ITGB1-208ENST00000464001 KRTAP10-3P60369 221 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 IRX1P78414 480 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-208ENST00000464001 HTD2P86397 168 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 CEBPZQ03701 1054 aaKnown RBP3.82□□□□□ -1.8
ITGB1-208ENST00000464001 RUNX1T1Q06455 604 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 SGCGQ13326 291 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 ITGA7Q13683 1181 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 KIR2DS3Q14952 304 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 MORF4L2Q15014 288 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 MAJINQ3KP22 176 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 NHSL2Q5HYW2 709 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 GLRA4Q5JXX5 417 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 GKAP1Q5VSY0 366 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-208ENST00000464001 FAM53AQ6NSI3 398 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-208ENST00000464001 OLFM4Q6UX06 510 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 CCBE1Q6UXH8 406 aaPredicted RBP3.82□□□□□ -1.8
ITGB1-208ENST00000464001 CLEC17AQ6ZS10 378 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 RABEPKQ7Z6M1 372 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 KBTBD6Q86V97 674 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms