RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 TCP1P17987 556 aaKnown RBP17.42■□□□□ 0.38
LINC00960-201ENST00000463183 TUBB4BP68371 445 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 C19orf57Q0VDD7 668 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 THOC5Q13769 683 aaKnown RBP17.42■□□□□ 0.38
LINC00960-201ENST00000463183 TUBB2AQ13885 445 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 TBR1Q16650 682 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 CTSL3PQ5NE16 218 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 ATP1A1-AS1Q5TC04 95 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 PRAMEF17Q5VTA0 474 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 KIAA0930Q6ICG6 404 aaPredicted RBP17.42■□□□□ 0.38
LINC00960-201ENST00000463183 OTOAQ7RTW8 1153 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 KLHL7Q8IXQ5 586 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 SLC22A15Q8IZD6 547 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 LSM14AQ8ND56 463 aaKnown RBP17.42■□□□□ 0.38
LINC00960-201ENST00000463183 STARD8Q92502 1023 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 IL17FQ96PD4 163 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 EFHD1Q9BUP0 239 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 TUBB2BQ9BVA1 445 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 P2RY12Q9H244 342 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 SPHK1Q9NYA1 384 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 NEU2Q9Y3R4 380 aa17.42■□□□□ 0.38
LINC00960-201ENST00000463183 CTAGE9A4FU28 777 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 TMEM150CB9EJG8 249 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 TK2O00142 265 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 PFDN6O15212 129 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 NIPSNAP2O75323 286 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 GPC4O75487 556 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 CHRM5P08912 532 aaPredicted RBP17.41■□□□□ 0.38
LINC00960-201ENST00000463183 UGT2B7P16662 529 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 F8A1P23610 371 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 AOAHP28039 575 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 LINC00303Q3SY05 128 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 ANKRD20A4Q4UJ75 823 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 DNAJC21Q5F1R6 531 aaKnown RBP17.41■□□□□ 0.38
LINC00960-201ENST00000463183 FAM199XQ6PEV8 388 aaPredicted RBP17.41■□□□□ 0.38
LINC00960-201ENST00000463183 SPESP1Q6UW49 350 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 FAM20CQ8IXL6 584 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 MCUQ8NE86 351 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 N4BP2L2Q92802 583 aaPredicted RBP17.41■□□□□ 0.38
LINC00960-201ENST00000463183 ZNF501Q96CX3 271 aaPredicted RBP17.41■□□□□ 0.38
LINC00960-201ENST00000463183 SLC45A3Q96JT2 553 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 TRAPPC9Q96Q05 1148 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 KCND1Q9NSA2 647 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 PADI1Q9ULC6 663 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 CDYLQ9Y232 598 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 BTRCQ9Y297 605 aa17.41■□□□□ 0.38
LINC00960-201ENST00000463183 CES2O00748 559 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 KDM1AO60341 852 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 TPBGLP0DKB5 382 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 MLNP12872 115 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 TCN2P20062 427 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 CHRM3P20309 590 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 BDKRB1P46663 353 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 MAP7Q14244 749 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 DEFB110Q30KQ9 67 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 ZNF470Q6ECI4 717 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 NEPROQ6NW34 567 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 CNSTQ6PJW8 725 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 LRRC6Q86X45 466 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 PPIL6Q8IXY8 311 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 CARFQ8N187 725 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 ZNF843Q8N446 348 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 NAT8LQ8N9F0 302 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 EXD3Q8N9H8 876 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 CT55Q8WUE5 264 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 LPGAT1Q92604 370 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 NAPGQ99747 312 aaPredicted RBP17.4■□□□□ 0.38
LINC00960-201ENST00000463183 SLC7A5P2Q9GIP4 190 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 AKIRIN1Q9H9L7 192 aaPredicted RBP17.4■□□□□ 0.38
LINC00960-201ENST00000463183 LHX9Q9NQ69 397 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 FBXO6Q9NRD1 293 aaPredicted RBP17.4■□□□□ 0.38
LINC00960-201ENST00000463183 C20orf96Q9NUD7 363 aaPredicted RBP17.4■□□□□ 0.38
LINC00960-201ENST00000463183 IRAK4Q9NWZ3 460 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 NFS1Q9Y697 457 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 SPTBP11277 2137 aa17.4■□□□□ 0.38
LINC00960-201ENST00000463183 FAM237BA0A1B0GVD1 139 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 KRT87PA6NCN2 255 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 E5RI56 91 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 CPNE3O75131 537 aaKnown RBP17.39■□□□□ 0.37
LINC00960-201ENST00000463183 BANF1O75531 89 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 MT-ND3P03897 115 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 RPN2P04844 631 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 ITGB2P05107 769 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 RPS3P23396 243 aaKnown RBP eCLIP17.39■□□□□ 0.37
LINC00960-201ENST00000463183 CDC20Q12834 499 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 CTBP1Q13363 440 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 DNASE1L3Q13609 305 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 ERV3-1Q14264 604 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 TYSND1Q2T9J0 566 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 DEFB109BQ30KR1 87 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 ZNF789Q5FWF6 425 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 RNF187Q5TA31 235 aaPredicted RBP17.39■□□□□ 0.37
LINC00960-201ENST00000463183 DCUN1D3Q8IWE4 304 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 DENND6AQ8IWF6 608 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 AGGF1Q8N302 714 aaeCLIP17.39■□□□□ 0.37
LINC00960-201ENST00000463183 OR1L3Q8NH93 324 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 MR1Q95460 341 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 CLIP3Q96DZ5 547 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 WBP1Q96G27 269 aa17.39■□□□□ 0.37
LINC00960-201ENST00000463183 RUFY1Q96T51 708 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms