RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 LINGO1Q96FE5 620 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 THOC3Q96J01 351 aaKnown RBP2.88□□□□□ -1.95
HDAC6-212ENST00000461608 ZNF479Q96JC4 524 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 PCYT2Q99447 389 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 FEVQ99581 238 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 CPNE1Q99829 537 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 TUBA1CQ9BQE3 449 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 TUBB2BQ9BVA1 445 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 COPS7BQ9H9Q2 264 aaPredicted RBP2.88□□□□□ -1.95
HDAC6-212ENST00000461608 MRGBPQ9NV56 204 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 CDH7Q9ULB5 785 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 LIPT1Q9Y234 373 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 PADI2Q9Y2J8 665 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 TRIM17Q9Y577 477 aa2.88□□□□□ -1.95
HDAC6-212ENST00000461608 A0A1W2PRB8 838 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 DENND3A2RUS2 1198 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 CTAGE9A4FU28 777 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 OOEPA6NGQ2 149 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 OR6C76A6NM76 312 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 O00370 1275 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 SMAD6O43541 496 aaKnown RBP2.87□□□□□ -1.95
HDAC6-212ENST00000461608 WISP2O76076 250 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 PGLSO95336 258 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 GCNT3O95395 438 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 MOCS3O95396 460 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 WDPCPO95876 746 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 IGHV4-39P01824 125 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 GBAP04062 536 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 SUPT20HL2P0C7V6 817 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 CTAGE8P0CG41 777 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 PDGFRAP16234 1089 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 CKMT2P17540 419 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 HSD17B3P37058 310 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 ARCN1P48444 511 aaKnown RBP2.87□□□□□ -1.95
HDAC6-212ENST00000461608 BRWD1-AS2P59051 145 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 ISL1P61371 349 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 DLK1P80370 383 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 KLC1Q07866 573 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 MZT1Q08AG7 82 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 ZBTB17Q13105 803 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 ITGA7Q13683 1181 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 KEAP1Q14145 624 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 MORF4L2Q15014 288 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 SF3B4Q15427 424 aaKnown RBP eCLIP2.87□□□□□ -1.95
HDAC6-212ENST00000461608 KRTAP27-1Q3LI81 207 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 FUT11Q495W5 492 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 ACCSLQ4AC99 568 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 SYT14P1Q58G82 188 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 TCTE1Q5JU00 501 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 MPP7Q5T2T1 576 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 FAM91A1Q658Y4 838 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 PLXDC2Q6UX71 529 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 CCDC91Q7Z6B0 441 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 COMMD2Q86X83 199 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 CTAGE4Q8IX94 777 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 TMCO5AQ8N6Q1 288 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 TRIML1Q8N9V2 468 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 RNF128Q8TEB7 428 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 SYN2Q92777 582 aaPredicted RBP2.87□□□□□ -1.95
HDAC6-212ENST00000461608 CORO2AQ92828 525 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 DNASE1L2Q92874 299 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 NEUROG1Q92886 237 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 IL17FQ96PD4 163 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 MTMR12Q9C0I1 747 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 VN1R1Q9GZP7 353 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 MIS12Q9H081 205 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 ARRDC1-AS1Q9H2J1 176 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 FZD8Q9H461 694 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 DDX31Q9H8H2 851 aaKnown RBP2.87□□□□□ -1.95
HDAC6-212ENST00000461608 EVA1AQ9H8M9 152 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 CDH20Q9HBT6 801 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 APOBEC3GQ9HC16 384 aaKnown RBP2.87□□□□□ -1.95
HDAC6-212ENST00000461608 OSER1Q9NX31 292 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 DDX43Q9NXZ2 648 aaKnown RBP2.87□□□□□ -1.95
HDAC6-212ENST00000461608 TBC1D7Q9P0N9 293 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 MALT1Q9UDY8 824 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 POLLQ9UGP5 575 aa2.87□□□□□ -1.95
HDAC6-212ENST00000461608 FEZF1A0PJY2 475 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 GAPDHSO14556 408 aaPredicted RBP2.86□□□□□ -1.95
HDAC6-212ENST00000461608 ACOT8O14734 319 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 SLC7A4O43246 635 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 AP5Z1O43299 807 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 ALPLP05186 524 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 CSN3P07498 182 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 ZFYP08048 801 aaPredicted RBP2.86□□□□□ -1.95
HDAC6-212ENST00000461608 SNRNP70P08621 437 aaKnown RBP2.86□□□□□ -1.95
HDAC6-212ENST00000461608 KRT19P08727 400 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 PLA2G4BP0C869 781 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 SNHG28P0DPA3 235 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 HAPLN1P10915 354 aaPredicted RBP2.86□□□□□ -1.95
HDAC6-212ENST00000461608 IRF2P14316 349 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 EPORP19235 508 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 CD22P20273 847 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 TLX1P31314 330 aaPredicted RBP2.86□□□□□ -1.95
HDAC6-212ENST00000461608 PTGER4P35408 488 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 RPL21P46778 160 aaKnown RBP2.86□□□□□ -1.95
HDAC6-212ENST00000461608 MAPK12P53778 367 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 HNRNPKP61978 463 aaKnown RBP eCLIP2.86□□□□□ -1.95
HDAC6-212ENST00000461608 TUBB4BP68371 445 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 RPL24P83731 157 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms