RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	KLHL6	Q8WZ60	621 aa		12.37	□□□□□ -0.43
FDPS-204	ENST00000461507	KIAA1143	Q96AT1	154 aa	Predicted RBP	12.37	□□□□□ -0.43
FDPS-204	ENST00000461507	SIGLEC10	Q96LC7	697 aa		12.37	□□□□□ -0.43
FDPS-204	ENST00000461507	TGM7	Q96PF1	710 aa		12.37	□□□□□ -0.43
FDPS-204	ENST00000461507	PANX3	Q96QZ0	392 aa		12.37	□□□□□ -0.43
FDPS-204	ENST00000461507	EBNA1BP2	Q99848	306 aa	Known RBP	12.37	□□□□□ -0.43
FDPS-204	ENST00000461507	FAM167B	Q9BTA0	163 aa		12.37	□□□□□ -0.43
FDPS-204	ENST00000461507	GPN2	Q9H9Y4	310 aa	Predicted RBP	12.37	□□□□□ -0.43
FDPS-204	ENST00000461507	ZC3H7B	Q9UGR2	993 aa	Known RBP	12.37	□□□□□ -0.43
FDPS-204	ENST00000461507	ASF1A	Q9Y294	204 aa		12.37	□□□□□ -0.43
FDPS-204	ENST00000461507	VPS9D1	Q9Y2B5	631 aa		12.37	□□□□□ -0.43
FDPS-204	ENST00000461507	TDRKH	Q9Y2W6	561 aa	Known RBP	12.37	□□□□□ -0.43
FDPS-204	ENST00000461507	HEBP2	Q9Y5Z4	205 aa		12.37	□□□□□ -0.43
FDPS-204	ENST00000461507	ZIC2	O95409	532 aa	Predicted RBP	12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	FGF5	P12034	268 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	CHRM3	P20309	590 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	IVD	P26440	423 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	SLC1A2	P43004	574 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	MAGEA3	P43357	314 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	ARCN1	P48444	511 aa	Known RBP	12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	CDC20	Q12834	499 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	PRKG2	Q13237	762 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	CTBP1	Q13363	440 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	IL11RA	Q14626	422 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	MSS51	Q4VC12	460 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	HSP90AA5P	Q58FG0	334 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	SPANXN3	Q5MJ09	141 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	KLHL35	Q6PF15	583 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	FAM92B	Q6ZTR7	304 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	CENPU	Q71F23	418 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	OTOA	Q7RTW8	1153 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	CCDC25	Q86WR0	208 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	DENND6A	Q8IWF6	608 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	AGGF1	Q8N302	714 aa	eCLIP	12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	PHC3	Q8NDX5	983 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	MNS1	Q8NEH6	495 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	CALML6	Q8TD86	181 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	TFG	Q92734	400 aa	Predicted RBP	12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	SGSM3	Q96HU1	749 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	SLC41A2	Q96JW4	573 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	ERP44	Q9BS26	406 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	SLC25A18	Q9H1K4	315 aa		12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	UBR5	O95071	2799 aa	Predicted RBP	12.36	□□□□□ -0.43
FDPS-204	ENST00000461507	ZCWPW2	A0A1B0GU75	182 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	GSAP	A4D1B5	854 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	OR6C74	A6NCV1	312 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	SUV39H1	O43463	412 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	NIPSNAP2	O75323	286 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	TTC4	O95801	387 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	TUBB4A	P04350	444 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	ERVK-10	P10266	1014 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	NDUFS1	P28331	727 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	CCR7	P32248	378 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	SEPHS1	P49903	392 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	POLE2	P56282	527 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	MPP1	Q00013	466 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	SLC7A5	Q01650	507 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	PRKAA1	Q13131	559 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	RPA4	Q13156	261 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	ARMC3	Q5W041	872 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	TMEM135	Q86UB9	458 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	OOSP2	Q86WS3	158 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	LRRC6	Q86X45	466 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	CILP2	Q8IUL8	1156 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	ZBED8	Q8IZ13	594 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	UNC5B	Q8IZJ1	945 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	FBXO36	Q8NEA4	188 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	OR4E2	Q8NGC2	313 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	ASZ1	Q8WWH4	475 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	LCN9	Q8WX39	176 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	UBXN4	Q92575	508 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	ZDHHC12	Q96GR4	267 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	NAT9	Q9BTE0	207 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	FAM117A	Q9C073	453 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	OR52A5	Q9H2C5	316 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	SAYSD1	Q9NPB0	183 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	IL17B	Q9UHF5	180 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	HEMK1	Q9Y5R4	338 aa	Predicted RBP	12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	FAM169A	Q9Y6X4	670 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	PTPN13	Q12923	2485 aa		12.35	□□□□□ -0.43
FDPS-204	ENST00000461507	PIKFYVE	Q9Y2I7	2098 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	CTAGE15	A4D2H0	777 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507		H3BMM5	538 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	NKX2-8	O15522	239 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	KIF1C	O43896	1103 aa	Known RBP	12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	WISP1	O95388	367 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	CTAGE8	P0CG41	777 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	ZNF28	P17035	718 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	NELFE	P18615	380 aa	Known RBP	12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	OAS2	P29728	719 aa	Known RBP	12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	CARS	P49589	748 aa	Known RBP	12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	ARL4D	P49703	201 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	PLTP	P55058	493 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	SH3BP2	P78314	561 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	MC1R	Q01726	317 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	PLOD1	Q02809	727 aa	Predicted RBP	12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	ABR	Q12979	859 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	KCNAB2	Q13303	367 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	TYSND1	Q2T9J0	566 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms