RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 A0A0J9YY10 115 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 HNRNPRO43390 633 aaKnown RBP14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 SPOPO43791 374 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 AKR1B10O60218 316 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 ALBP02768 609 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 EDN3P14138 238 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 MMP11P24347 488 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 PSMA3P25788 255 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 ACRV1P26436 265 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 OTX2P32243 289 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 ARCN1P48444 511 aaKnown RBP14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 SLC5A12Q1EHB4 618 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 YOD1Q5VVQ6 348 aaPredicted RBP14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 PACS1Q6VY07 963 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 LUZP1Q86V48 1076 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 CFAP206Q8IYR0 622 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 LILRA3Q8N6C8 439 aaPredicted RBP14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 FLVCR1-AS1Q8TAF5 88 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 CPLX3Q8WVH0 158 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 C19orf60Q96EN9 201 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 VPS50Q96JG6 964 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 SLX1AQ9BQ83 275 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 ABHD10Q9NUJ1 306 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 ZNHIT6Q9NWK9 470 aaKnown RBP14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 SAE1Q9UBE0 346 aaPredicted RBP14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 POLG2Q9UHN1 485 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 GPN3Q9UHW5 284 aaPredicted RBP14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 ICKQ9UPZ9 632 aa14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 PTRH2Q9Y3E5 179 aaKnown RBP14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 COPG1Q9Y678 874 aaKnown RBP14.05□□□□□ -0.16
DNMT3A-207ENST00000461228 A6NL46 340 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 KRT86O43790 486 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 FKBP9O95302 570 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 UMODP07911 640 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 UGT2B7P16662 529 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 COMTP21964 271 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 ITGA3P26006 1051 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 ELAVL4P26378 380 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 PTPN7P35236 360 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 COPS2P61201 443 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 ITIH4Q14624 930 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 KIR2DS3Q14952 304 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 CYP2A13Q16696 494 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 C11orf63Q6NUN7 778 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 RPUSD3Q6P087 351 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 FBXO38Q6PIJ6 1188 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 CUZD1Q86UP6 607 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 TBC1D21Q8IYX1 336 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 OR5K2Q8NHB8 316 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 TFGQ92734 400 aaPredicted RBP14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 N4BP2L2Q92802 583 aaPredicted RBP14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 RANBP9Q96S59 729 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 ATP13A2Q9NQ11 1180 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 LUC7LQ9NQ29 371 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 MAP10Q9P2G4 905 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 IFT80Q9P2H3 777 aaPredicted RBP14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 NOVA2Q9UNW9 492 aaKnown RBP14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 PDZD2O15018 2839 aa14.04□□□□□ -0.16
DNMT3A-207ENST00000461228 TACC2O95359 2948 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 DCHS2Q6V1P9 2916 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 A0A1B0GX78 115 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 CCDC66A2RUB6 948 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 GOLGA6L19H0YKK7 550 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 BUD23O43709 281 aaKnown RBP14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 MFAP3LO75121 409 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 ARSFP54793 590 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 KYNUQ16719 465 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 NKAIN1Q4KMZ8 207 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 FAM69BQ5VUD6 431 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 CAVIN1Q6NZI2 390 aaKnown RBP14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 ZC3H18Q86VM9 953 aaKnown RBP14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 HOOK3Q86VS8 718 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 CDKL3Q8IVW4 592 aaPredicted RBP14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 RCOR2Q8IZ40 523 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 CISD2Q8N5K1 135 aaKnown RBP14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 OR2A14Q96R47 310 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 FERD3LQ96RJ6 166 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 HGH1Q9BTY7 390 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 TXLNGQ9NUQ3 528 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 NTNG1Q9Y2I2 539 aa14.03□□□□□ -0.16
DNMT3A-207ENST00000461228 MDC1Q14676 2089 aaKnown RBP14.02□□□□□ -0.16
DNMT3A-207ENST00000461228 A0A1W2PQ72 361 aa14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 LDB2O43679 373 aa14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 CNOT3O75175 753 aaKnown RBP14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 STK10O94804 968 aaKnown RBP14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 ZRANB2O95218 330 aaKnown RBP eCLIP14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 AP2A1O95782 977 aa14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 FTH1P02794 183 aa14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 POLBP06746 335 aa14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 STSP08842 583 aa14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 CHRM5P08912 532 aaPredicted RBP14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 CBSLP0DN79 551 aa14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 PIM1P11309 404 aaPredicted RBP14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 PVRP15151 417 aa14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 ACADLP28330 430 aa14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 CBSP35520 551 aa14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 NSG1P42857 185 aa14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 ZRSR2Q15696 482 aaKnown RBP14.02□□□□□ -0.17
DNMT3A-207ENST00000461228 PRAMEF13Q5VWM6 474 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms