RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 COG4Q9H9E3 785 aa12.55□□□□□ -0.4
TREX1-203ENST00000456089 KCND1Q9NSA2 647 aa12.55□□□□□ -0.4
TREX1-203ENST00000456089 CATSPERZQ9NTU4 200 aa12.55□□□□□ -0.4
TREX1-203ENST00000456089 SAMD15Q9P1V8 674 aa12.55□□□□□ -0.4
TREX1-203ENST00000456089 PCDHGA6Q9Y5G7 932 aa12.55□□□□□ -0.4
TREX1-203ENST00000456089 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.54□□□□□ -0.4
TREX1-203ENST00000456089 ARGFXA6NJG6 315 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 BTN3A3O00478 584 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 BTN3A1O00481 513 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 PFDN6O15212 129 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 CPNE3O75131 537 aaKnown RBP12.54□□□□□ -0.4
TREX1-203ENST00000456089 ZBTB11O95625 1053 aaPredicted RBP12.54□□□□□ -0.4
TREX1-203ENST00000456089 PAMP19021 973 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 PSMA3P25788 255 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 MGAT1P26572 445 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 PTPN4P29074 926 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 FNTAP49354 379 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 TTPAP49638 278 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 PMS2P54278 862 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 TUBB4BP68371 445 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 CRADDP78560 199 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 PLOD1Q02809 727 aaPredicted RBP12.54□□□□□ -0.4
TREX1-203ENST00000456089 KLRB1Q12918 225 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 PRKAA1Q13131 559 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 PRKG2Q13237 762 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 TUBB2AQ13885 445 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 CYP1B1Q16678 543 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 TTC27Q6P3X3 843 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 PACS1Q6VY07 963 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 NAPRTQ6XQN6 538 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 SDCCAG8Q86SQ7 713 aaPredicted RBP12.54□□□□□ -0.4
TREX1-203ENST00000456089 KMT5CQ86Y97 462 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 LCN9Q8WX39 176 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 ZNF778Q96MU6 729 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 CD180Q99467 661 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 HGH1Q9BTY7 390 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 TUBB2BQ9BVA1 445 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 CHST8Q9H2A9 424 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 OR52A5Q9H2C5 316 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 SRMSQ9H3Y6 488 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 MAST4O15021 2626 aa12.54□□□□□ -0.4
TREX1-203ENST00000456089 NAV2Q8IVL1 2488 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 SEC16AO15027 2179 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 USP27XA6NNY8 438 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 C21orf140B9A014 251 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 TMEM150CB9EJG8 249 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 LIN7AO14910 233 aaPredicted RBP12.53□□□□□ -0.4
TREX1-203ENST00000456089 ZNF185O15231 689 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 CD3EAPO15446 510 aaKnown RBP12.53□□□□□ -0.4
TREX1-203ENST00000456089 NDUFS3O75489 264 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 ST6GAL1P15907 406 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 CD151P48509 253 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 ACVR1Q04771 509 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 SRSF1Q07955 248 aaKnown RBP eCLIP12.53□□□□□ -0.4
TREX1-203ENST00000456089 BOP1Q14137 746 aaKnown RBP12.53□□□□□ -0.4
TREX1-203ENST00000456089 BRD3Q15059 726 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 UGT8Q16880 541 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 ZNF658BQ4V348 819 aaPredicted RBP12.53□□□□□ -0.4
TREX1-203ENST00000456089 TMTC4Q5T4D3 741 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 TCTN3Q6NUS6 607 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 CYB5D1Q6P9G0 228 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 TRIM73Q86UV7 250 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 TEX19Q8NA77 164 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 ACVR1CQ8NER5 493 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 OR52E1Q8NGJ3 308 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 OR1L3Q8NH93 324 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 GSDMBQ8TAX9 411 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 SGSM3Q96HU1 749 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 CAPZA3Q96KX2 299 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 NAPGQ99747 312 aaPredicted RBP12.53□□□□□ -0.4
TREX1-203ENST00000456089 MRM3Q9HC36 420 aaKnown RBP12.53□□□□□ -0.4
TREX1-203ENST00000456089 XAB2Q9HCS7 855 aaKnown RBP12.53□□□□□ -0.4
TREX1-203ENST00000456089 SYBUQ9NX95 663 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 POMT2Q9UKY4 750 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 FARSAQ9Y285 508 aaKnown RBP12.53□□□□□ -0.4
TREX1-203ENST00000456089 BTRCQ9Y297 605 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 PRSS21Q9Y6M0 314 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 SHANK1Q9Y566 2161 aa12.53□□□□□ -0.4
TREX1-203ENST00000456089 TCRBV7S3A2A0A539 114 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 MAGEB16A2A368 324 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 CTAGE9A4FU28 777 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 SDR42E2A6NKP2 422 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 GOLGA8MH3BSY2 632 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 MAP3K7O43318 606 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 KDM1AO60341 852 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 OR1I1O60431 355 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 NMBRP28336 390 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 PRDX3P30048 256 aaKnown RBP12.52□□□□□ -0.41
TREX1-203ENST00000456089 PAFAH1B1P43034 410 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 PTGIRP43119 386 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 CCL11P51671 97 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 RPS15P62841 145 aaKnown RBP12.52□□□□□ -0.41
TREX1-203ENST00000456089 UBAP2LQ14157 1087 aaKnown RBP12.52□□□□□ -0.41
TREX1-203ENST00000456089 KCNJ11Q14654 390 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 TMED2Q15363 201 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 KCTD19Q17RG1 926 aaPredicted RBP12.52□□□□□ -0.41
TREX1-203ENST00000456089 PTCHD3Q3KNS1 767 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 PLEKHS1Q5SXH7 462 aa12.52□□□□□ -0.41
TREX1-203ENST00000456089 PTRHD1Q6GMV3 140 aaKnown RBP12.52□□□□□ -0.41
TREX1-203ENST00000456089 MRNIPQ6NTE8 343 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms