RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 APH1BQ8WW43 257 aa18.29■□□□□ 0.52
PTPA-223ENST00000452489 ERVK-6Q9BXR3 956 aa18.29■□□□□ 0.52
PTPA-223ENST00000452489 ASAH2Q9NR71 780 aa18.29■□□□□ 0.52
PTPA-223ENST00000452489 PAPSS2O95340 614 aaPredicted RBP18.28■□□□□ 0.52
PTPA-223ENST00000452489 HSMCR30P0CW71 290 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 KIR2DL3P43628 341 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 TKTL1P51854 596 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 LIMK1P53667 647 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 RGS1Q08116 209 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 CDH17Q12864 832 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 IGSF11Q5DX21 431 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 FBXO48Q5FWF7 155 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 PPP1R26Q5T8A7 1209 aaPredicted RBP18.28■□□□□ 0.52
PTPA-223ENST00000452489 TYW3Q6IPR3 259 aaKnown RBP18.28■□□□□ 0.52
PTPA-223ENST00000452489 CEP68Q76N32 757 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 LAX1Q8IWV1 398 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 PGBD5Q8N414 524 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 ANKRD53Q8N9V6 530 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 OR2T12Q8NG77 320 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 NCLNQ969V3 563 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 DEFB129Q9H1M3 183 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 TMX2Q9Y320 296 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 NFICP08651 508 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 RPS3P23396 243 aaKnown RBP eCLIP18.28■□□□□ 0.524e-6■■■■□ 22.8
PTPA-223ENST00000452489 ARL2P36404 184 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 SLC19A1P41440 591 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 BRCC3P46736 316 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 NRIP1P48552 1158 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 MADCAM1Q13477 382 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 TATDN3Q17R31 274 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 GPR158Q5T848 1215 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 TIGD3Q6B0B8 471 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 PKN3Q6P5Z2 889 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 TMEM81Q6P7N7 255 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 COMMD7Q86VX2 200 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 HIPK1Q86Z02 1210 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 PTGR2Q8N8N7 351 aaPredicted RBP18.28■□□□□ 0.52
PTPA-223ENST00000452489 CDYL2Q8N8U2 506 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 TTC29Q8NA56 475 aaPredicted RBP18.28■□□□□ 0.52
PTPA-223ENST00000452489 IPCEF1Q8WWN9 437 aaPredicted RBP18.28■□□□□ 0.52
PTPA-223ENST00000452489 ST8SIA2Q92186 375 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 FCGR1BQ92637 280 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 CENPIQ92674 756 aaPredicted RBP18.28■□□□□ 0.52
PTPA-223ENST00000452489 FAM162AQ96A26 154 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 CYP2S1Q96SQ9 504 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 SRRQ9GZT4 340 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 WDR81Q562E7 1941 aa18.28■□□□□ 0.52
PTPA-223ENST00000452489 ARPC4-TTLL3A0A0A6YYG9 625 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 BTN1A1Q13410 526 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 TMEM207Q6UWW9 146 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 C16orf62Q7Z3J2 963 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 PAF1Q8N7H5 531 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 ZNF675Q8TD23 568 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 AKAP1Q92667 903 aaKnown RBP eCLIP18.27■□□□□ 0.526e-19■■■■■ 60.8
PTPA-223ENST00000452489 TBATAQ96M53 351 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 PDCD2LQ9BRP1 358 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 GTPBP2Q9BX10 602 aaKnown RBP18.27■□□□□ 0.52
PTPA-223ENST00000452489 MIOSQ9NXC5 875 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 FZD10Q9ULW2 581 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 HSPE1-MOB4S4R3N1 261 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 OR5K4A6NMS3 321 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 PPM1BO75688 479 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 ICAM1P05362 532 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 FGF4P08620 206 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 HLA-DMAP28067 261 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 ZNF33BQ06732 778 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 AANATQ16613 207 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 LIPIQ6XZB0 460 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 FNDC5Q8NAU1 212 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 C2CD4AQ8NCU7 369 aaPredicted RBP18.27■□□□□ 0.52
PTPA-223ENST00000452489 OR7D4Q8NG98 312 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 OR10A6Q8NH74 314 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 RIT1Q92963 219 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 GORASP2Q9H8Y8 452 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 DYRK4Q9NR20 520 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 FARSBQ9NSD9 589 aaKnown RBP18.27■□□□□ 0.52
PTPA-223ENST00000452489 STOML2Q9UJZ1 356 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 NEUROG3Q9Y4Z2 214 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 ALG5Q9Y673 324 aa18.27■□□□□ 0.52
PTPA-223ENST00000452489 SEC22BO75396 215 aa18.26■□□□□ 0.51
PTPA-223ENST00000452489 CXCL8P10145 99 aa18.26■□□□□ 0.51
PTPA-223ENST00000452489 ALAS2P22557 587 aa18.26■□□□□ 0.51
PTPA-223ENST00000452489 RGS6P49758 472 aa18.26■□□□□ 0.51
PTPA-223ENST00000452489 SCN1BQ07699 218 aa18.26■□□□□ 0.51
PTPA-223ENST00000452489 CARD16Q5EG05 197 aa18.26■□□□□ 0.51
PTPA-223ENST00000452489 ISCA2Q86U28 154 aa18.26■□□□□ 0.51
PTPA-223ENST00000452489 KIF18BQ86Y91 864 aa18.26■□□□□ 0.51
PTPA-223ENST00000452489 RYBPQ8N488 228 aaPredicted RBP18.26■□□□□ 0.51
PTPA-223ENST00000452489 C9orf62Q8N4C0 152 aa18.26■□□□□ 0.51
PTPA-223ENST00000452489 DNAJA4Q8WW22 397 aaPredicted RBP18.26■□□□□ 0.51
PTPA-223ENST00000452489 CAMKK2Q96RR4 588 aa18.26■□□□□ 0.51
PTPA-223ENST00000452489 DCLRE1CQ96SD1 692 aaKnown RBP18.26■□□□□ 0.51
PTPA-223ENST00000452489 USB1Q9BQ65 265 aaKnown RBP18.26■□□□□ 0.51
PTPA-223ENST00000452489 PPIL3Q9H2H8 161 aaKnown RBP18.26■□□□□ 0.51
PTPA-223ENST00000452489 NDRG4Q9ULP0 352 aaKnown RBP18.26■□□□□ 0.51
PTPA-223ENST00000452489 NT5C1B-RDH14C9J2C7 533 aa18.26■□□□□ 0.51
PTPA-223ENST00000452489 LINC01387J3KSC0 135 aa18.26■□□□□ 0.51
PTPA-223ENST00000452489 MSCO60682 206 aa18.26■□□□□ 0.51
PTPA-223ENST00000452489 MRPS14O60783 128 aaKnown RBP18.26■□□□□ 0.51
PTPA-223ENST00000452489 ATF6P18850 670 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms