RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 RGS4P49798 205 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 GPX6P59796 221 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 PDAP1Q13442 181 aaKnown RBP13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 GBX1Q14549 363 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 C16orf72Q14CZ0 275 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 KLHL38Q2WGJ6 581 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 TEX35Q5T0J7 233 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 HECTD2Q5U5R9 776 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 CACHD1Q5VU97 1274 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 LRRC8EQ6NSJ5 796 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 FAM92BQ6ZTR7 304 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 NEK10Q6ZWH5 1172 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 CTAGE3PQ8IX95 158 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 CD200R1Q8TD46 325 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 FBF1Q8TES7 1133 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 ELMO2Q96JJ3 720 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 CD180Q99467 661 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 XKR8Q9H6D3 395 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 LRRC4CQ9HCJ2 640 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 PISDQ9UG56 409 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 SLC39A10Q9ULF5 831 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 VWA7Q9Y334 891 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 DMXL2Q8TDJ6 3036 aa13.62□□□□□ -0.23
GTF3C3-206ENST00000448539 SRRM3A6NNA2 597 aaPredicted RBP13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 C2orf74A8MZ97 194 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 BRINP1O60477 761 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 TNFSF15O95150 251 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 CATP04040 527 aaKnown RBP13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 ANKRD34CP0C6C1 535 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 MPC1LP0DKB6 136 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 HGFP14210 728 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 SAT1P21673 171 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 MCM3P25205 808 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 MAP4P27816 1152 aaKnown RBP13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 MLLT3P42568 568 aaPredicted RBP13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 ARL4DP49703 201 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 MAPK10P53779 464 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 SLC12A2P55011 1212 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 RBM20Q5T481 1227 aaKnown RBP13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 PRSS42Q7Z5A4 293 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 ARHGAP22Q7Z5H3 698 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 FAM129CQ86XR2 697 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 CPNE9Q8IYJ1 553 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 GIMAP7Q8NHV1 300 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 MDM1Q8TC05 714 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 RAD51AP1Q96B01 352 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 VPS39Q96JC1 886 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 SLC30A3Q99726 388 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 CPNE1Q99829 537 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 RAB11FIP5Q9BXF6 653 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 THSD1Q9NS62 852 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 OR6C2Q9NZP2 312 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 PLAGL1Q9UM63 463 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 ICKQ9UPZ9 632 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 RUVBL2Q9Y230 463 aaKnown RBP13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 PSAT1Q9Y617 370 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 NFS1Q9Y697 457 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 CHD6Q8TD26 2715 aa13.61□□□□□ -0.23
GTF3C3-206ENST00000448539 FAM95CA0A1B0GW59 222 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 PIPSLA2A3N6 862 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 TLCD2A6NGC4 264 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 FAM159BA6NKW6 160 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 EFCAB7A8K855 629 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 CXorf49A8MYA2 514 aaPredicted RBP13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 EIF3FO00303 357 aaPredicted RBP13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 BTN3A1O00481 513 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 PIAS1O75925 651 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 MATN4O95460 622 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 C1orf105O95561 183 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 ITGA2BP08514 1039 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 IGF2RP11717 2491 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 CD9P21926 228 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 CDH3P22223 829 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 GP5P40197 560 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 BDKRB1P46663 353 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 SEPHS1P49903 392 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 RAB28P51157 221 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 CDKN2DP55273 166 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 SLMAPQ14BN4 828 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 KYNUQ16719 465 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 KBTBD12Q3ZCT8 623 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 TMEM164Q5U3C3 297 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 ZC3HC1Q86WB0 502 aaKnown RBP13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 RELL1Q8IUW5 271 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 MYO1HQ8N1T3 1032 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 PPM1NQ8N819 430 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 LRRN4CLQ8ND94 238 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 UBXN4Q92575 508 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 ZNF578Q96N58 590 aaPredicted RBP13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 SLC46A1Q96NT5 459 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 RHOJQ9H4E5 214 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 ZNF768Q9H5H4 540 aaKnown RBP13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 SMYD2Q9NRG4 433 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 NFU1Q9UMS0 254 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 MED16Q9Y2X0 877 aa13.6□□□□□ -0.23
GTF3C3-206ENST00000448539 LAMA5O15230 3695 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 A0A1W2PNU3 283 aaPredicted RBP13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 PABPN1LA6NDY0 278 aaKnown RBP13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 BTN3A3O00478 584 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 MAP3K7O43318 606 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms