RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 RPS18P62269 152 aaKnown RBP17.13■□□□□ 0.33
DDX56-207ENST00000448192 RPS15P62841 145 aaKnown RBP17.13■□□□□ 0.33
DDX56-207ENST00000448192 ABRQ12979 859 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 PTRHD1Q6GMV3 140 aaKnown RBP17.13■□□□□ 0.33
DDX56-207ENST00000448192 ATG14Q6ZNE5 492 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 VRK3Q8IV63 474 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 SLC22A15Q8IZD6 547 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 KRT222Q8N1A0 295 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 OTUD6BQ8N6M0 293 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 CFAP61Q8NHU2 1237 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 C9orf43Q8TAL5 461 aaPredicted RBP17.13■□□□□ 0.33
DDX56-207ENST00000448192 LKAAEAR1Q8TD35 194 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 ASZ1Q8WWH4 475 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 CPT1BQ92523 772 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 AP1M1Q9BXS5 423 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 GPR87Q9BY21 358 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 TRIM4Q9C037 500 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 SLC7A5P2Q9GIP4 190 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 SYTL2Q9HCH5 934 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 TREX1Q9NSU2 369 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 SYBUQ9NX95 663 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 SPHK1Q9NYA1 384 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 SERTAD3Q9UJW9 196 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 KCNMB2Q9Y691 235 aa17.13■□□□□ 0.33
DDX56-207ENST00000448192 SNRNP200O75643 2136 aaKnown RBP17.12■□□□□ 0.33
DDX56-207ENST00000448192 TCRBV7S3A2A0A539 114 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 PRMT5O14744 637 aaPredicted RBP17.12■□□□□ 0.33
DDX56-207ENST00000448192 KDM1AO60341 852 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 NDUFS3O75489 264 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 APOA4P06727 396 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 TPSB2P20231 275 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 PTPN4P29074 926 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 TPSAB1Q15661 275 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 LRRC8BQ6P9F7 803 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 CES3Q6UWW8 571 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 CDHR3Q6ZTQ4 885 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 N4BP2L2Q92802 583 aaPredicted RBP17.12■□□□□ 0.33
DDX56-207ENST00000448192 ABHD17AQ96GS6 310 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 OR2A14Q96R47 310 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 CHST8Q9H2A9 424 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 ACTR5Q9H9F9 607 aaPredicted RBP17.12■□□□□ 0.33
DDX56-207ENST00000448192 OR6C2Q9NZP2 312 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 CDYLQ9Y232 598 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 MAN2B2Q9Y2E5 1009 aa17.12■□□□□ 0.33
DDX56-207ENST00000448192 ISM1B1AKI9 464 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 MEN1O00255 615 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 GPC4O75487 556 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 VAPBO95292 243 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 MSL3P1P0C860 447 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 AOAHP28039 575 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 ITGA1P56199 1179 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 CDK16Q00536 496 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 GPS1Q13098 491 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 TMED2Q15363 201 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 DNAJC21Q5F1R6 531 aaKnown RBP17.11■□□□□ 0.33
DDX56-207ENST00000448192 PLEKHS1Q5SXH7 462 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 DSELQ8IZU8 1212 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 C19orf47Q8N9M1 422 aaKnown RBP17.11■□□□□ 0.33
DDX56-207ENST00000448192 MFSD3Q96ES6 412 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 MS4A14Q96JA4 679 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 FAM60AQ9NP50 221 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 CIDEBQ9UHD4 219 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 GNPTGQ9UJJ9 305 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 FARSAQ9Y285 508 aaKnown RBP17.11■□□□□ 0.33
DDX56-207ENST00000448192 JRKLQ9Y4A0 524 aa17.11■□□□□ 0.33
DDX56-207ENST00000448192 SPTA1P02549 2419 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 GOLGA8KD6RF30 607 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 E7EQ34 232 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 GOLGA8TH3BQL2 631 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 AVILO75366 819 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 RECKO95980 971 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 KRT14P02533 472 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 RPN2P04844 631 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 EIF3BP55884 814 aaKnown RBP17.1■□□□□ 0.33
DDX56-207ENST00000448192 SARNPP82979 210 aaKnown RBP17.1■□□□□ 0.33
DDX56-207ENST00000448192 DEFB110Q30KQ9 67 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 ZNF789Q5FWF6 425 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 LCN10Q6JVE6 187 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 TTC27Q6P3X3 843 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 ZNF517Q6ZMY9 492 aaPredicted RBP17.1■□□□□ 0.33
DDX56-207ENST00000448192 SYVN1Q86TM6 617 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 GPR135Q8IZ08 494 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 MPP5Q8N3R9 675 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 GSDMBQ8TAX9 411 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 SEC14L1Q92503 715 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 MAGOHBQ96A72 148 aaKnown RBP17.1■□□□□ 0.33
DDX56-207ENST00000448192 TCTN2Q96GX1 697 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 PBKQ96KB5 322 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 LRFN5Q96NI6 719 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 PANX3Q96QZ0 392 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 KIFC1Q9BW19 673 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 P2RY12Q9H244 342 aa17.1■□□□□ 0.33
DDX56-207ENST00000448192 A0A0J9YY10 115 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 ZNF749O43361 778 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 RORAP35398 523 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 RAB28P51157 221 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 KCNJ11Q14654 390 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 ZIC1Q15915 447 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 UGT8Q16880 541 aa17.09■□□□□ 0.33
DDX56-207ENST00000448192 PTCHD3Q3KNS1 767 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms