RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 MYL9P24844 172 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 LIPAP38571 399 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 ARL4AP40617 200 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 NFKB2Q00653 900 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 GARNL3Q5VVW2 1013 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 KCTD11Q693B1 232 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 SPESP1Q6UW49 350 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 CEP97Q8IW35 865 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 DTWD1Q8N5C7 304 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 OR4M2Q8NGB6 313 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 KLHL6Q8WZ60 621 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 C18orf25Q96B23 403 aaPredicted RBP18.82■□□□□ 0.6
HMGA1-205ENST00000447654 OSMRQ99650 979 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 FAM124BQ9H5Z6 455 aaPredicted RBP18.82■□□□□ 0.6
HMGA1-205ENST00000447654 MAGIXQ9H6Y5 334 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 ERVMER34-1Q9H9K5 563 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 KLHL20Q9Y2M5 609 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 V9GYQ6 96 aa18.82■□□□□ 0.6
HMGA1-205ENST00000447654 ARPC4-TTLL3A0A0A6YYG9 625 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 OR5K4A6NMS3 321 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 GADD45AP24522 165 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 ATICP31939 592 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 DCTP40126 519 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 RAB25P57735 213 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 SNX16P57768 344 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 SCN1BQ07699 218 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 COL19A1Q14993 1142 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 BTBD16Q32M84 506 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 CLVS2Q5SYC1 327 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 TMEM65Q6PI78 240 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 PLEKHM3Q6ZWE6 761 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 GLB1L3Q8NCI6 653 aaPredicted RBP18.81■□□□□ 0.6
HMGA1-205ENST00000447654 TMEM40Q8WWA1 233 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 CENPIQ92674 756 aaPredicted RBP18.81■□□□□ 0.6
HMGA1-205ENST00000447654 TBC1D20Q96BZ9 403 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 AP2M1Q96CW1 435 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 KCTD15Q96SI1 283 aaPredicted RBP18.81■□□□□ 0.6
HMGA1-205ENST00000447654 MRPL45Q9BRJ2 306 aaKnown RBP18.81■□□□□ 0.6
HMGA1-205ENST00000447654 C14orf119Q9NWQ9 140 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 MRPL39Q9NYK5 338 aaKnown RBP18.81■□□□□ 0.6
HMGA1-205ENST00000447654 BTRCQ9Y297 605 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 ASPDHA6ND91 283 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 NEMP2A6NFY4 417 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 UBFD1O14562 309 aaKnown RBP18.81■□□□□ 0.6
HMGA1-205ENST00000447654 SEC14L5O43304 696 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 ADORA3P0DMS8 318 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 CPN2P22792 545 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 CA5AP35218 305 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 CD83Q01151 205 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 CCL14Q16627 93 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 CLEC6AQ6EIG7 209 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 PRSS42Q7Z5A4 293 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 LINC00518Q8N0U6 118 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 YIPF7Q8N8F6 280 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 DTX3Q8N9I9 347 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 PYCR2Q96C36 320 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 TRNT1Q96Q11 434 aaKnown RBP18.81■□□□□ 0.6
HMGA1-205ENST00000447654 PARK7Q99497 189 aaKnown RBP18.81■□□□□ 0.6
HMGA1-205ENST00000447654 CYP3A43Q9HB55 503 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 MFHAS1Q9Y4C4 1052 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 KLK4Q9Y5K2 254 aa18.81■□□□□ 0.6
HMGA1-205ENST00000447654 SLC22A5O76082 557 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 PDE9AO76083 593 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 LCKP06239 509 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 SMIM10L2AP0DMW4 78 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 SMIM10L2BP0DMW5 78 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 IL1RNP18510 177 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 ATF6P18850 670 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 CD72P21854 359 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 SLC12A2P55011 1212 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 RBP5P82980 135 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 RHAGQ02094 409 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 GALEQ14376 348 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 CST9Q5W186 159 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 ARSKQ6UWY0 536 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 PID1Q7Z2X4 250 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 TSPYL5Q86VY4 417 aaPredicted RBP18.8■□□□□ 0.6
HMGA1-205ENST00000447654 ZDHHC17Q8IUH5 632 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 GPALPP1Q8IXQ4 340 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 TMEM245Q9H330 911 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 NXF3Q9H4D5 531 aaKnown RBP18.8■□□□□ 0.6
HMGA1-205ENST00000447654 ING3Q9NXR8 418 aa18.8■□□□□ 0.6
HMGA1-205ENST00000447654 LTA4HP09960 611 aaKnown RBP18.79■□□□□ 0.6
HMGA1-205ENST00000447654 CHMP24386 653 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 RGS7P49802 495 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 SCNN1GP51170 649 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 SLC6A3Q01959 620 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 ELP6Q0PNE2 266 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 PROX2Q3B8N5 592 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 FUT11Q495W5 492 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 TNIP3Q96KP6 325 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 IFT22Q9H7X7 185 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 RNF121Q9H920 327 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 WASH6PQ9NQA3 447 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 TSPAN16Q9UKR8 245 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 DNAJC15Q9Y5T4 150 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 SLC35F4A4IF30 521 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 M0R082 166 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 GRAP2O75791 330 aa18.79■□□□□ 0.6
HMGA1-205ENST00000447654 F7P08709 466 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms