RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CAPN1P07384 714 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 GSTM1P09488 218 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 OR56A5P0C7T3 313 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 TPSB2P20231 275 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 NR1D1P20393 614 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 AOAHP28039 575 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 GABRA4P48169 554 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 ARL4DP49703 201 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 GSTM4Q03013 218 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 PRKAA1Q13131 559 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 KCNAB2Q13303 367 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 IL10RAQ13651 578 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 TPSAB1Q15661 275 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 DEFB110Q30KQ9 67 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 SYTL3Q4VX76 610 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 PLEKHS1Q5SXH7 462 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 SPESP1Q6UW49 350 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 ZNF517Q6ZMY9 492 aaPredicted RBP10.52□□□□□ -0.73
SF3A1-203ENST00000444440 CDHR3Q6ZTQ4 885 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 CAND1Q86VP6 1230 aaKnown RBP10.52□□□□□ -0.73
SF3A1-203ENST00000444440 PTRH1Q86Y79 214 aaKnown RBP10.52□□□□□ -0.73
SF3A1-203ENST00000444440 TMEM126BQ8IUX1 230 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 TMEM151BQ8IW70 566 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 TBC1D21Q8IYX1 336 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 SLC22A15Q8IZD6 547 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 SLC35F6Q8N357 371 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 C2orf73Q8N5S3 287 aaPredicted RBP10.52□□□□□ -0.73
SF3A1-203ENST00000444440 LINC01555Q8NAE3 123 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 OR5K2Q8NHB8 316 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 COG1Q8WTW3 980 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 CPT1BQ92523 772 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 PDLIM2Q96JY6 352 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 IL17FQ96PD4 163 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 KIFC1Q9BW19 673 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 ACTL8Q9H568 366 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 KCND1Q9NSA2 647 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 TRMT1Q9NXH9 659 aaKnown RBP10.52□□□□□ -0.73
SF3A1-203ENST00000444440 GALPQ9UBC7 116 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 PADI1Q9ULC6 663 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 PCDHGA6Q9Y5G7 932 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 NFS1Q9Y697 457 aa10.52□□□□□ -0.73
SF3A1-203ENST00000444440 SCN2AQ99250 2005 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 SHANK1Q9Y566 2161 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 PIPSLA2A3N6 862 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 C2orf74A8MZ97 194 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 J3QKU1 62 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 ZNF185O15231 689 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 SUV39H1O43463 412 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 CPNE3O75131 537 aaKnown RBP10.51□□□□□ -0.73
SF3A1-203ENST00000444440 CREG1O75629 220 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 VAPBO95292 243 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 KRT14P02533 472 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 CHRM5P08912 532 aaPredicted RBP10.51□□□□□ -0.73
SF3A1-203ENST00000444440 RORAP35398 523 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 MAGEA6P43360 314 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 NPY2RP49146 381 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 HSPA14Q0VDF9 509 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 CCSMST1Q4G0I0 132 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 CRTC2Q53ET0 693 aaPredicted RBP10.51□□□□□ -0.73
SF3A1-203ENST00000444440 LYPLAL1Q5VWZ2 237 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 ZNF385CQ66K41 422 aaPredicted RBP10.51□□□□□ -0.73
SF3A1-203ENST00000444440 LRRC8BQ6P9F7 803 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 NLRP9Q7RTR0 991 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 PRICKLE2Q7Z3G6 844 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 DSELQ8IZU8 1212 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 CARFQ8N187 725 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 C19orf47Q8N9M1 422 aaKnown RBP10.51□□□□□ -0.73
SF3A1-203ENST00000444440 CFAP61Q8NHU2 1237 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 PEX13Q92968 403 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.51□□□□□ -0.73
SF3A1-203ENST00000444440 BIRC8Q96P09 236 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 CATSPER2Q96P56 530 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 FCRL4Q96PJ5 515 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 EFHD1Q9BUP0 239 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 CARD6Q9BX69 1037 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 TRIM55Q9BYV6 548 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 IL22Q9GZX6 179 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 SLC25A18Q9H1K4 315 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 CHST8Q9H2A9 424 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 ADNPQ9H2P0 1102 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 ZNF71Q9NQZ8 489 aaPredicted RBP10.51□□□□□ -0.73
SF3A1-203ENST00000444440 LATS2Q9NRM7 1088 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 PCMTD2Q9NV79 361 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 SOX13Q9UN79 622 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 KLHL20Q9Y2M5 609 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 KCNMB2Q9Y691 235 aa10.51□□□□□ -0.73
SF3A1-203ENST00000444440 SCN3AQ9NY46 2000 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.5□□□□□ -0.73
SF3A1-203ENST00000444440 CDC14CA4D256 554 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 USP27XA6NNY8 438 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 AP3B1O00203 1094 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 MATN2O00339 956 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 PRMT5O14744 637 aaPredicted RBP10.5□□□□□ -0.73
SF3A1-203ENST00000444440 NIPSNAP2O75323 286 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 DNAJB5O75953 348 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 SLCO2B1O94956 709 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 PDGFAP04085 211 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 CCNYL3P0C7X3 344 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 PKLRP30613 574 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 SHMT2P34897 504 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms