RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 BAHCC1Q9P281 2608 aa3.18□□□□□ -1.9
HMGB3P12-201ENST00000438745 RANBP2P49792 3224 aaKnown RBP3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 ADGRB1O14514 1584 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 KDRP35968 1356 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 NPC1L1Q9UHC9 1359 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 MUC6Q6W4X9 2439 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 CDRT15L2A8MXV6 281 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 FAM90A26D6RGX4 464 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 TMEM189-UBE2V1I3L0A0 370 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 J3QR06 171 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 MAP2K7O14733 419 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 SMAD9O15198 467 aaKnown RBP3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 ZBTB43O43298 467 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 DAB1O75553 588 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 PGM3O95394 542 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 BCL10O95999 233 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 CCL5P13501 91 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 HOXA13P31271 388 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 NF2P35240 595 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 NNMTP40261 264 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 IFI35P80217 286 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 NUCB1Q02818 461 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 SPOCK1Q08629 439 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 UBE2V1Q13404 147 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 TNIP1Q15025 636 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 MEP1AQ16819 746 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 KRTCAP3Q53RY4 240 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 RARS2Q5T160 578 aaKnown RBP3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 OTUD3Q5T2D3 398 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 IRAK1BP1Q5VVH5 260 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 PAPD4Q6PIY7 484 aaKnown RBP3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 BRAT1Q6PJG6 821 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 TMCO3Q6UWJ1 677 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 MOB2Q70IA6 237 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 NFE4Q86UQ8 179 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 HACE1Q8IYU2 909 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 BBS10Q8TAM1 723 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 RAET1EQ8TD07 263 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 U2AF1L4Q8WU68 220 aaKnown RBP3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 SLC38A5Q8WUX1 472 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 SLC22A18Q96BI1 424 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 QRFPRQ96P65 431 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 ABHD1Q96SE0 405 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 KLHL4Q9C0H6 718 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 CSTL1Q9H114 145 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 TAS2R14Q9NYV8 317 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 SEC63Q9UGP8 760 aaKnown RBP3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 PLAGL1Q9UM63 463 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 AMDHD2Q9Y303 409 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 OR2W1Q9Y3N9 320 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 BCORQ6W2J9 1755 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 PTPRCP08575 1304 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 FAM205AQ6ZU69 1335 aa3.17□□□□□ -1.9
HMGB3P12-201ENST00000438745 KTN1Q86UP2 1357 aaKnown RBP3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 BRCA2P51587 3418 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 A0A1W2PR77 199 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 CTAGE9A4FU28 777 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 C16orf97H3BN30 126 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 ADAMDEC1O15204 470 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 KCNN4O15554 427 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 PAPSS1O43252 624 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 TMCC2O75069 709 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 ZNF217O75362 1048 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 ERAL1O75616 437 aaKnown RBP3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 GH2P01242 217 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 CFC1BP0CG36 223 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 CFC1P0CG37 223 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 CTAGE8P0CG41 777 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 ITGA2P17301 1181 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 KCNA5P22460 613 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 HRH2P25021 359 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 NMBRP28336 390 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 ALDH1B1P30837 517 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 CDKN1AP38936 164 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 USP8P40818 1118 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 MATR3P43243 847 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 FASLGP48023 281 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 MMP14P50281 582 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 STAT2P52630 851 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 CRIP2P52943 208 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 PITX1P78337 314 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 CXCL9Q07325 125 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 DMP1Q13316 513 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 BECN1Q14457 450 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 PCLAFQ15004 111 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 NTRK2Q16620 822 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 MYLK3Q32MK0 819 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 C19orf48Q6RUI8 117 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 GALNT5Q7Z7M9 940 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 KMT5CQ86Y97 462 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 FOXP4Q8IVH2 680 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 CEP97Q8IW35 865 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 CTAGE4Q8IX94 777 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 RNF113BQ8IZP6 322 aaKnown RBP3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 TRPC4APQ8TEL6 797 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 ZFAND2BQ8WV99 257 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 DNAAF4Q8WXU2 420 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 PIGTQ969N2 578 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 CEP295NLQ96MC4 621 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms