RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 CHIT1Q13231 466 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 PHF13Q86YI8 300 aaPredicted RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 BAP1Q92560 729 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 THRSPQ92748 146 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 OR10A4Q9H209 315 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 POLR1AO95602 1720 aaPredicted RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 EDDM13A0A1B0GTR0 161 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 ACOT7O00154 380 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 BCKDKO14874 412 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 KDM4BO94953 1096 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 ABHD2P08910 425 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 PBX3P40426 434 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 NR1H2P55055 460 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 PRKCDQ05655 676 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 ITGB3BPQ13352 177 aaPredicted RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 DIRAS2Q96HU8 199 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 CEP295NLQ96MC4 621 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 CIDEBQ9UHD4 219 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 GTF2IRD1Q9UHL9 959 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 CIB4A0PJX0 185 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 YDJCA8MPS7 323 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 PCDHGA12O60330 932 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 NRP2O60462 931 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 PLA2G16P53816 162 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 TMEM35AQ53FP2 167 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 Q9N2J8 555 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 RAB9BQ9NP90 201 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 PAK6Q9NQU5 681 aaPredicted RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 EIF3KQ9UBQ5 218 aaKnown RBP11.01□□□□□ -0.65
SCN4A-201ENST00000435607 CEP152O94986 1710 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 MAGI3Q5TCQ9 1506 aa11.01□□□□□ -0.65
SCN4A-201ENST00000435607 HNRNPLP14866 589 aaKnown RBP eCLIP11□□□□□ -0.65
SCN4A-201ENST00000435607 ZNF16P17020 682 aaPredicted RBP11□□□□□ -0.65
SCN4A-201ENST00000435607 CUZD1Q86UP6 607 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 LIX1LQ8IVB5 337 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 ARL14EPQ8N8R7 260 aaPredicted RBP11□□□□□ -0.65
SCN4A-201ENST00000435607 KLK6Q92876 244 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 KLHL15Q96M94 604 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 PLEKHA6Q9Y2H5 1048 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 MYH10P35580 1976 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 ECT2LQ008S8 904 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 CAPSQ13938 189 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 SIDT2Q8NBJ9 832 aaKnown RBP11□□□□□ -0.65
SCN4A-201ENST00000435607 ZNF285Q96NJ3 590 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 PCDHA2Q9Y5H9 948 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 DISP2A7MBM2 1401 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 A8MUA0 341 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 EPHB6O15197 1021 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 MID1O15344 667 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 FADS2O95864 444 aaKnown RBP11□□□□□ -0.65
SCN4A-201ENST00000435607 ZNF84P51523 738 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 NFATC2Q13469 925 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 ARMCX6Q7L4S7 300 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 LINGO2Q7L985 606 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 LRRTM4Q86VH4 590 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 SERPINA9Q86WD7 417 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 NCSTNQ92542 709 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 IPPKQ9H8X2 491 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 ARHGAP20Q9P2F6 1191 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 DGKBQ9Y6T7 804 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 ATP6AP2A0A1C7CYW4 349 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 KRT36O76013 467 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 PSMG1O95456 288 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 PFKMP08237 780 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 HCKP08631 526 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 RFC2P35250 354 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 MAD2L1BPQ15013 274 aaPredicted RBP11□□□□□ -0.65
SCN4A-201ENST00000435607 TTMPQ5BVD1 217 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 SLC9A9Q8IVB4 645 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 MAPK15Q8TD08 544 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 GATAD2BQ8WXI9 593 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 CCM2Q9BSQ5 444 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 SLC5A7Q9GZV3 580 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 FN3KQ9H479 309 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 FBXL12Q9NXK8 326 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 DAPL1A0PJW8 107 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 ACTL6BO94805 426 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 HMGN1P05114 100 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 CCNCP24863 283 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 PTGER3P43115 390 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 RPS15P62841 145 aaKnown RBP11□□□□□ -0.65
SCN4A-201ENST00000435607 CDKL4Q5MAI5 379 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 C12orf29Q8N999 325 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 Q8N9G6 341 aaPredicted RBP11□□□□□ -0.65
SCN4A-201ENST00000435607 KIAA0895Q8NCT3 520 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 PACSIN3Q9UKS6 424 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 SLC38A8A6NNN8 435 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 PLOD2O00469 737 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 ENDOUP21128 410 aaKnown RBP11□□□□□ -0.65
SCN4A-201ENST00000435607 GRIK2Q13002 908 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 TIGD2Q4W5G0 525 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 VARS2Q5ST30 1063 aaKnown RBP11□□□□□ -0.65
SCN4A-201ENST00000435607 OR2L2Q8NH16 312 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 DNAJB8Q8NHS0 232 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 STK32AQ8WU08 396 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 ERMAPQ96PL5 475 aaPredicted RBP11□□□□□ -0.65
SCN4A-201ENST00000435607 LGMNQ99538 433 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 ORAI3Q9BRQ5 295 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 ABCB8Q9NUT2 735 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 AASSQ9UDR5 926 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms