RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 DPP10Q8N608 796 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 KRTCAP2Q8N6L1 136 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 KIAA1191Q96A73 305 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 CENPOQ9BU64 300 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 ACTL8Q9H568 366 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 AGO3Q9H9G7 860 aaKnown RBP11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 SYTL2Q9HCH5 934 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 KRT84Q9NSB2 600 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 TAS2R13Q9NYV9 303 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 AGO1Q9UL18 857 aaKnown RBP11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 ABCG2Q9UNQ0 655 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 EVPLLA8MZ36 301 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 SOCS7O14512 581 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 CPNE3O75131 537 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 MLYCDO95822 493 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 ACVR2AP27037 513 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 GRK5P34947 590 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 CD83Q01151 205 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 GALK2Q01415 458 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 DDR2Q16832 855 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 XKR7Q5GH72 579 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 TIGD7Q6NT04 549 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 LETMD1Q6P1Q0 360 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 HORMAD1Q86X24 394 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 RHEBL1Q8TAI7 183 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 UBASH3BQ8TF42 649 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 FUBP1Q96AE4 644 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 ZBED3Q96IU2 234 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 SLC25A51Q9H1U9 297 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 CATSPERZQ9NTU4 200 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 PCTPQ9UKL6 214 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 KCNH4Q9UQ05 1017 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 CLDN24A6NM45 220 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 PER2O15055 1255 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 IFI30P13284 250 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 CYP2C18P33260 490 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 HMGCS1Q01581 520 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 IL18R1Q13478 541 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 KCTD2Q14681 263 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 MAD2L1BPQ15013 274 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 CPZQ66K79 652 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 SIGIRRQ6IA17 410 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 NOTUMQ6P988 496 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 ZNF517Q6ZMY9 492 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 EFL1Q7Z2Z2 1120 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 C11orf74Q86VG3 221 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 MICALL2Q8IY33 904 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 OR4L1Q8NH43 312 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 SCAMP5Q8TAC9 235 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 MTFMTQ96DP5 389 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 ZFP42Q96MM3 310 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 FYTTD1Q96QD9 318 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 OR52E6Q96RD3 313 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 PHOX2BQ99453 314 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 DPY30Q9C005 99 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 SP110Q9HB58 689 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 DCAF13Q9NV06 445 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 TOR4AQ9NXH8 423 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 DERAQ9Y315 318 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 TLL1O43897 1013 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 NDUFS3O75489 264 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 GUCA1CO95843 209 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 PPP3CCP48454 512 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 IHHQ14623 411 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 ABRAXAS2Q15018 415 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 FXNQ16595 210 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 LRRC26Q2I0M4 334 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 TUBA3EQ6PEY2 450 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 GPSM1Q86YR5 675 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 RIOX2Q8IUF8 465 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 C10orf111Q8N326 155 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 SIDT2Q8NBJ9 832 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 OR8J3Q8NGG0 315 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 DNASE1L2Q92874 299 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 ZNF566Q969W8 418 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 CDCA5Q96FF9 252 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 PYURFQ96I23 114 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 NECTIN4Q96NY8 510 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 TRNT1Q96Q11 434 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 SNX18Q96RF0 628 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 MMP28Q9H239 520 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 EXOSC4Q9NPD3 245 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 KLHL20Q9Y2M5 609 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 SAMHD1Q9Y3Z3 626 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 MAU2Q9Y6X3 613 aa11.32□□□□□ -0.6
HMGCS1-202ENST00000433297 H3BRB1 525 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 MEN1O00255 615 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 AREL1O15033 823 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 LDB2O43679 373 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 PCDHGA12O60330 932 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 SCELO95171 688 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 WISP3O95389 354 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 RPLP0P05388 317 aaKnown RBP11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 ABCB1P08183 1280 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 JUNDP17535 347 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 PNPLA4P41247 253 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 RENBPP51606 427 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 RPP38P78345 283 aaKnown RBP11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 PTPRNQ16849 979 aa11.31□□□□□ -0.6
HMGCS1-202ENST00000433297 PAN2Q504Q3 1202 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms