RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ANKS6Q68DC2 871 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZNF787Q6DD87 383 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZNF470Q6ECI4 717 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 KIAA0930Q6ICG6 404 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 CNSTQ6PJW8 725 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 UNC5AQ6ZN44 842 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 LRRC69Q6ZNQ3 347 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 OTOAQ7RTW8 1153 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 MAATS1Q7Z4T9 603 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 ARHGAP22Q7Z5H3 698 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 HOOK3Q86VS8 718 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 KCNMB4Q86W47 210 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 CILP2Q8IUL8 1156 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 PALM2Q8IXS6 379 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 RBM12BQ8IXT5 1001 aaKnown RBP5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZBED8Q8IZ13 594 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 BBOF1Q8ND07 529 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 AGBL5Q8NDL9 886 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 FBXO36Q8NEA4 188 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 OR52E1Q8NGJ3 308 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 GSDMBQ8TAX9 411 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 ASZ1Q8WWH4 475 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 LPGAT1Q92604 370 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 ART4Q93070 314 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 PMEPA1Q969W9 287 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 GRAMD1AQ96CP6 724 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZDHHC12Q96GR4 267 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 LIN37Q96GY3 246 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 CRELD1Q96HD1 420 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 SGSM3Q96HU1 749 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 C9orf72Q96LT7 481 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 PPM1MQ96MI6 270 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZNF578Q96N58 590 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 BIRC8Q96P09 236 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 PANX3Q96QZ0 392 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 MAP3K3Q99759 626 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 DPYSL5Q9BPU6 564 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 ERP44Q9BS26 406 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 HGH1Q9BTY7 390 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 KLHL25Q9H0H3 589 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 TRIT1Q9H3H1 467 aaKnown RBP5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 SRMSQ9H3Y6 488 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 RUBCNLQ9H714 662 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 UCK1Q9HA47 277 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 APMAPQ9HDC9 416 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 THSD1Q9NS62 852 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 FOXJ2Q9P0K8 574 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZC3H7BQ9UGR2 993 aaKnown RBP5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 GNPTGQ9UJJ9 305 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 RUVBL2Q9Y230 463 aaKnown RBP5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 ADAMTS20P59510 1910 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 IGHV5-51A0A0C4DH38 117 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 ESYT3A0FGR9 886 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 KRT87PA6NCN2 255 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 OR5K3A6NET4 321 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 LILRA5A6NI73 299 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLC9B1P1A6NJY1 282 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 CDRT15L2A8MXV6 281 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 ISM1B1AKI9 464 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 C9orf172C9J069 976 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 TGFBR3LH3BV60 316 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 BTN3A1O00481 513 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 KPNA5O15131 536 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 POLR1CO15160 346 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 TP73O15350 636 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 KLK10O43240 276 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 ICMTO60725 284 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 GPC4O75487 556 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 PIAS1O75925 651 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 C9P02748 559 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 AHSGP02765 367 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 GSTM1P09488 218 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 EPB42P16452 691 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 PCSK2P16519 638 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 OGNP20774 298 aaKnown RBP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 SAT1P21673 171 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 CDH3P22223 829 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 RPS3P23396 243 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 ACADLP28330 430 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 NDUFS1P28331 727 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 PRDX3P30048 256 aaKnown RBP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 SSTR1P30872 391 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLC1A2P43004 574 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 MAGEA3P43357 314 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 CAPZBP47756 277 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 PGGT1BP53609 377 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 PLTPP55058 493 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 PCBP4P57723 403 aaKnown RBP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 GSTM4Q03013 218 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 CKAP4Q07065 602 aaKnown RBP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 PRKAA1Q13131 559 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 RPA4Q13156 261 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 EIF3IQ13347 325 aaKnown RBP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 TRA2AQ13595 282 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 CUL1Q13616 776 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 TSTA3Q13630 321 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 KCNAB1Q14722 419 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 CRYMQ14894 314 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 FASTKD3Q14CZ7 662 aaKnown RBP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 TMED2Q15363 201 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms