RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 MAPK10P53779 464 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 COL9A2Q14055 689 aaPredicted RBP6.83□□□□□ -1.32
CDC7-203ENST00000428239 AGAP9Q5VTM2 703 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 RBM44Q6ZP01 1051 aaKnown RBP6.83□□□□□ -1.32
CDC7-203ENST00000428239 PLXDC1Q8IUK5 500 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 CNTN4Q8IWV2 1026 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 TBC1D21Q8IYX1 336 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 EIF1ADQ8N9N8 165 aaKnown RBP6.83□□□□□ -1.32
CDC7-203ENST00000428239 PPFIBP2Q8ND30 876 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 GPR156Q8NFN8 814 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 PPP4R1Q8TF05 950 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 RSC1A1Q92681 617 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 ATP6V1E2Q96A05 226 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 SCARF2Q96GP6 870 aaPredicted RBP6.83□□□□□ -1.32
CDC7-203ENST00000428239 ZDHHC12Q96GR4 267 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 PAIP2Q9BPZ3 127 aaKnown RBP6.83□□□□□ -1.32
CDC7-203ENST00000428239 NUDT22Q9BRQ3 303 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 OR52A5Q9H2C5 316 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 ALG9Q9H6U8 611 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 KCNK9Q9NPC2 374 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 SLC24A2Q9UI40 661 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 ASXL3Q9C0F0 2248 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 ARHGEF17Q96PE2 2063 aaPredicted RBP6.83□□□□□ -1.32
CDC7-203ENST00000428239 FANCMQ8IYD8 2048 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 PLXND1Q9Y4D7 1925 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 SLC5A10A0PJK1 596 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 CAPN5O15484 640 aaPredicted RBP6.83□□□□□ -1.32
CDC7-203ENST00000428239 OPA1O60313 960 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 CDH16O75309 829 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 SERPIND1P05546 499 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 SHMT2P34897 504 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 CCNFP41002 786 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 DMPKQ09013 629 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 ILF2Q12905 390 aaKnown RBP6.83□□□□□ -1.32
CDC7-203ENST00000428239 TSNQ15631 228 aaKnown RBP6.83□□□□□ -1.32
CDC7-203ENST00000428239 C3orf38Q5JPI3 329 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 CACHD1Q5VU97 1274 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 SUSD1Q6UWL2 747 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 ADAMTSL2Q86TH1 951 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 GPSM1Q86YR5 675 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 SRRM1Q8IYB3 904 aaKnown RBP6.83□□□□□ -1.32
CDC7-203ENST00000428239 SLC22A15Q8IZD6 547 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 C4orf33Q8N1A6 199 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 KCTD4Q8WVF5 259 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 SLC44A1Q8WWI5 657 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 SLC40A1Q9NP59 571 aa6.83□□□□□ -1.32
CDC7-203ENST00000428239 CCDC151A5D8V7 595 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 ZNF839A8K0R7 811 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 HYAL3O43820 417 aaPredicted RBP6.82□□□□□ -1.32
CDC7-203ENST00000428239 C2P06681 752 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 C8GP07360 202 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 ABHD2P08910 425 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 ZNF37AP17032 561 aaPredicted RBP6.82□□□□□ -1.32
CDC7-203ENST00000428239 TNFRSF8P28908 595 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 GMPRP36959 345 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 CLCN7P51798 805 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 ADARP55265 1226 aaKnown RBP6.82□□□□□ -1.32
CDC7-203ENST00000428239 NAE1Q13564 534 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 PROX2Q3B8N5 592 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 FBXO48Q5FWF7 155 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 CEP97Q8IW35 865 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 RBM12BQ8IXT5 1001 aaKnown RBP6.82□□□□□ -1.32
CDC7-203ENST00000428239 SNX31Q8N9S9 440 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 FAM181AQ8N9Y4 354 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 PPP1R14CQ8TAE6 165 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 DEPDC7Q96QD5 511 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 GPR22Q99680 433 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 ACBD3Q9H3P7 528 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 PLAC1Q9HBJ0 212 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 LAMA1P25391 3075 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 BHMG1C9JSJ3 638 aaPredicted RBP6.82□□□□□ -1.32
CDC7-203ENST00000428239 CDC7O00311 574 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 CSO75390 466 aaKnown RBP6.82□□□□□ -1.32
CDC7-203ENST00000428239 MT-CO3P00414 261 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 EIF2S1P05198 315 aaKnown RBP6.82□□□□□ -1.32
CDC7-203ENST00000428239 ANXA5P08758 320 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 CBSLP0DN79 551 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 XRCC1P18887 633 aaPredicted RBP6.82□□□□□ -1.32
CDC7-203ENST00000428239 FDXRP22570 491 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 CNTFP26441 200 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 CBSP35520 551 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 ACADVLP49748 655 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 RAB28P51157 221 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 GFERP55789 205 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 GPLD1P80108 840 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 UNC5DQ6UXZ4 953 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 SPRED1Q7Z699 444 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 TRIM73Q86UV7 250 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 MARCH9Q86YJ5 346 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 MYRIPQ8NFW9 859 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 OR5K2Q8NHB8 316 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 GIMAP7Q8NHV1 300 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 PYCR2Q96C36 320 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 TMEM74Q96NL1 305 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 SMC6Q96SB8 1091 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 CMKLR1Q99788 373 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 KIR3DX1Q9H7L2 352 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 NMRAL1Q9HBL8 299 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 SLC24A3Q9HC58 644 aa6.82□□□□□ -1.32
CDC7-203ENST00000428239 PISDQ9UG56 409 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms