RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 SGSM3Q96HU1 749 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 AP1M1Q9BXS5 423 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 CHST8Q9H2A9 424 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 TREX1Q9NSU2 369 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 SYBUQ9NX95 663 aa17.81■□□□□ 0.44
PSPC1-202ENST00000427943 TCRBV7S3A2A0A539 114 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 F8W8V4 182 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 CD3EAPO15446 510 aaKnown RBP17.8■□□□□ 0.44
PSPC1-202ENST00000427943 NRDCO43847 1150 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 CHRM5P08912 532 aaPredicted RBP17.8■□□□□ 0.44
PSPC1-202ENST00000427943 NR1D1P20393 614 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 PTPN4P29074 926 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 PPARGP37231 505 aaPredicted RBP17.8■□□□□ 0.44
PSPC1-202ENST00000427943 RPS15P62841 145 aaKnown RBP17.8■□□□□ 0.44
PSPC1-202ENST00000427943 IL10RAQ13651 578 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 DEFB110Q30KQ9 67 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 ZNF789Q5FWF6 425 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 LCN10Q6JVE6 187 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 CES3Q6UWW8 571 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 SLC22A15Q8IZD6 547 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 OTUD6BQ8N6M0 293 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 C19orf47Q8N9M1 422 aaKnown RBP17.8■□□□□ 0.44
PSPC1-202ENST00000427943 OR2A14Q96R47 310 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 TSSK1BQ9BXA7 367 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 IL22Q9GZX6 179 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 BFARQ9NZS9 450 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 CIDEBQ9UHD4 219 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 POLG2Q9UHN1 485 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 CDYLQ9Y232 598 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 MAN2B2Q9Y2E5 1009 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 MED13Q9UHV7 2174 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 MYO18BQ8IUG5 2567 aa17.8■□□□□ 0.44
PSPC1-202ENST00000427943 PRMT5O14744 637 aaPredicted RBP17.79■□□□□ 0.44
PSPC1-202ENST00000427943 MAP3K7O43318 606 aa17.79■□□□□ 0.44
PSPC1-202ENST00000427943 KLK3P07288 261 aaPredicted RBP17.79■□□□□ 0.44
PSPC1-202ENST00000427943 PEBP1P30086 187 aaKnown RBP17.79■□□□□ 0.44
PSPC1-202ENST00000427943 NPY2RP49146 381 aa17.79■□□□□ 0.44
PSPC1-202ENST00000427943 TTPAP49638 278 aa17.79■□□□□ 0.44
PSPC1-202ENST00000427943 PLOD1Q02809 727 aaPredicted RBP17.79■□□□□ 0.44
PSPC1-202ENST00000427943 PTRHD1Q6GMV3 140 aaKnown RBP17.79■□□□□ 0.44
PSPC1-202ENST00000427943 DSELQ8IZU8 1212 aa17.79■□□□□ 0.44
PSPC1-202ENST00000427943 LMNTD1Q8N9Z9 388 aa17.79■□□□□ 0.44
PSPC1-202ENST00000427943 CFAP61Q8NHU2 1237 aa17.79■□□□□ 0.44
PSPC1-202ENST00000427943 FLVCR1-AS1Q8TAF5 88 aa17.79■□□□□ 0.44
PSPC1-202ENST00000427943 CARD6Q9BX69 1037 aa17.79■□□□□ 0.44
PSPC1-202ENST00000427943 ACTR5Q9H9F9 607 aaPredicted RBP17.79■□□□□ 0.44
PSPC1-202ENST00000427943 SYTL2Q9HCH5 934 aa17.79■□□□□ 0.44
PSPC1-202ENST00000427943 FAM60AQ9NP50 221 aa17.79■□□□□ 0.44
PSPC1-202ENST00000427943 PCMTD2Q9NV79 361 aa17.79■□□□□ 0.44
PSPC1-202ENST00000427943 FARSAQ9Y285 508 aaKnown RBP17.79■□□□□ 0.44
PSPC1-202ENST00000427943 TP53TG5Q9Y2B4 290 aa17.79■□□□□ 0.44
PSPC1-202ENST00000427943 ISM1B1AKI9 464 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 E7EQ34 232 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 MEN1O00255 615 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 HCRTR1O43613 425 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 GPC4O75487 556 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 APOA4P06727 396 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 MSL3P1P0C860 447 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 TPSB2P20231 275 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 PKLRP30613 574 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 RORAP35398 523 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 ITGA1P56199 1179 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 TPSAB1Q15661 275 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 ZIC1Q15915 447 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 PTCHD3Q3KNS1 767 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 LACTB2Q53H82 288 aaPredicted RBP17.78■□□□□ 0.44
PSPC1-202ENST00000427943 DNAJC21Q5F1R6 531 aaKnown RBP17.78■□□□□ 0.44
PSPC1-202ENST00000427943 COLEC12Q5KU26 742 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 PLEKHS1Q5SXH7 462 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 FAM69BQ5VUD6 431 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 TTC27Q6P3X3 843 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 ZNF517Q6ZMY9 492 aaPredicted RBP17.78■□□□□ 0.44
PSPC1-202ENST00000427943 SYVN1Q86TM6 617 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 FAM20CQ8IXL6 584 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 N4BP2L2Q92802 583 aaPredicted RBP17.78■□□□□ 0.44
PSPC1-202ENST00000427943 MFSD3Q96ES6 412 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 MS4A14Q96JA4 679 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 LRFN5Q96NI6 719 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 GPR87Q9BY21 358 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 SLC7A5P2Q9GIP4 190 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 P2RY12Q9H244 342 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 HOMER3Q9NSC5 361 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 SERTAD3Q9UJW9 196 aa17.78■□□□□ 0.44
PSPC1-202ENST00000427943 SEC16AO15027 2179 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 A0A0J9YY10 115 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 GOLGA8KD6RF30 607 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 GOLGA8TH3BQL2 631 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 K7EM74 188 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 AP3B1O00203 1094 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 NDUFS3O75489 264 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 RFPL1O75677 317 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 DNAJB5O75953 348 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 VAPBO95292 243 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 WISP1O95388 367 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 ATXN8OSP0DMR3 200 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 ARNTP27540 789 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 AOAHP28039 575 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 PMS2P54278 862 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 EIF3BP55884 814 aaKnown RBP17.77■□□□□ 0.44
PSPC1-202ENST00000427943 GPS1Q13098 491 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms