RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 MAGEH1Q9H213 219 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 P2RX2Q9UBL9 471 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 TMPRSS11EQ9UL52 423 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 MAGED1Q9Y5V3 778 aaPredicted RBP14.19□□□□□ -0.14
PTPN13-203ENST00000427191 COL6A1P12109 1028 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 HSD3B1P14060 373 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 LRRC55Q6ZSA7 311 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 PARP8Q8N3A8 854 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 PCDHGA12O60330 932 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 COQ9O75208 318 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 E2F1Q01094 437 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 TATDN1Q6P1N9 297 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 ZFP3Q96NJ6 502 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 NECAB3Q96P71 396 aaPredicted RBP14.19□□□□□ -0.14
PTPN13-203ENST00000427191 TREM1Q9NP99 234 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 TCAF1Q9Y4C2 921 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 BORCS7-ASMTA0A0B4J1R7 106 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 ARL5CA6NH57 179 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 B4GALT4O60513 344 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 ALPPL2P10696 532 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 CLCN2P51788 898 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 SLC5A3P53794 718 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 DUSP4Q13115 394 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 ACTR6Q9GZN1 396 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 ITM2CQ9NQX7 267 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 C1orf167Q5SNV9 1468 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 CPNE3O75131 537 aaKnown RBP14.19□□□□□ -0.14
PTPN13-203ENST00000427191 SP140Q13342 867 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 TAF1AQ15573 450 aaPredicted RBP14.19□□□□□ -0.14
PTPN13-203ENST00000427191 UBAP2Q5T6F2 1119 aaKnown RBP14.19□□□□□ -0.14
PTPN13-203ENST00000427191 LCLAT1Q6UWP7 414 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 ZNF420Q8TAQ5 688 aaPredicted RBP14.19□□□□□ -0.14
PTPN13-203ENST00000427191 EXOSC8Q96B26 276 aaKnown RBP14.19□□□□□ -0.14
PTPN13-203ENST00000427191 ART5Q96L15 291 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 CEP295NLQ96MC4 621 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 TBCCD1Q9NVR7 557 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 A0A0G2JMP0 313 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 ZNF726A6NNF4 738 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 ITPKAP23677 461 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 AZGP1P25311 298 aaKnown RBP14.19□□□□□ -0.14
PTPN13-203ENST00000427191 SHMT1P34896 483 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 ABCG1P45844 678 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 KCNK18Q7Z418 384 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 LIX1Q8N485 282 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 OR4M2Q8NGB6 313 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 TTPALQ9BTX7 342 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 IGFLR1Q9H665 355 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 CPA4Q9UI42 421 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 CNTN6Q9UQ52 1028 aa14.19□□□□□ -0.14
PTPN13-203ENST00000427191 IFNA1P01562 189 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 HLA-DPB1P04440 258 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 ERVK-8P63133 956 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 FSTL1Q12841 308 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 LRIF1Q5T3J3 769 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 C9orf57Q5W0N0 161 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 SPATA22Q8NHS9 363 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 CSPG4P5Q96PW8 444 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 SDHAF3Q9NRP4 125 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 SNX10Q9Y5X0 201 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 ELOA3DA6NLF2 546 aaPredicted RBP14.18□□□□□ -0.14
PTPN13-203ENST00000427191 PRPS1L1P21108 318 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 MMP8P22894 467 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 EEFSECP57772 596 aaKnown RBP14.18□□□□□ -0.14
PTPN13-203ENST00000427191 KCTD19Q17RG1 926 aaPredicted RBP14.18□□□□□ -0.14
PTPN13-203ENST00000427191 INAVAQ3KP66 663 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 ELOA3BQ3SY89 546 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 ELOA3Q8NG57 546 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 DHRS1Q96LJ7 313 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 CDT1Q9H211 546 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 SLC17A7Q9P2U7 560 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 RAI2Q9Y5P3 530 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 TBC1D3DA0A087WVF3 549 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 TBC1D3IA0A087WXS9 549 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 TBC1D3EA0A087X179 549 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 TBC1D3KA0A087X1G2 549 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 TBC1D3FA6NER0 549 aaPredicted RBP14.18□□□□□ -0.14
PTPN13-203ENST00000427191 TBC1D3LB9A6J9 549 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 EML1O00423 815 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 CSTBP04080 98 aaKnown RBP14.18□□□□□ -0.14
PTPN13-203ENST00000427191 TBC1D3HP0C7X1 549 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 GJA1P17302 382 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 SEMA5AQ13591 1074 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 PUM1Q14671 1186 aaKnown RBP eCLIP14.18□□□□□ -0.14
PTPN13-203ENST00000427191 SEC23BQ15437 767 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 TBC1D3GQ6DHY5 549 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 TBC1D3CQ6IPX1 549 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 UBE2Q1Q7Z7E8 422 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 TBC1D3Q8IZP1 549 aaPredicted RBP14.18□□□□□ -0.14
PTPN13-203ENST00000427191 OR4K2Q8NGD2 314 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 DQX1Q8TE96 717 aaKnown RBP14.18□□□□□ -0.14
PTPN13-203ENST00000427191 ITPAQ9BY32 194 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 SNTG1Q9NSN8 517 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 SMIM10L2AP0DMW4 78 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 SMIM10L2BP0DMW5 78 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 CCR8P51685 355 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 RNF220Q5VTB9 566 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 DCDC5Q6ZRR9 648 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 ZNF676Q8N7Q3 588 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 NKD1Q969G9 470 aa14.18□□□□□ -0.14
PTPN13-203ENST00000427191 C12orf43Q96C57 262 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms