RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 BDKRB1P46663 353 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 LRP8Q14114 963 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 STARD3Q14849 445 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 MMEL1Q495T6 779 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 CCSMST1Q4G0I0 132 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 CRTC3Q6UUV7 619 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 RNF165Q6ZSG1 346 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 CDRT15Q96T59 188 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 C1orf50Q9BV19 199 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 ACTR8Q9H981 624 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 HEBP1Q9NRV9 189 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 SLC22A14Q9Y267 594 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 CCL27Q9Y4X3 112 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 PIAS3Q9Y6X2 628 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 H0Y3Z8 333 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 LSM1O15116 133 aaKnown RBP25.84■■□□□ 1.73
LDB1-202ENST00000425280 NRP2O60462 931 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 POP7O75817 140 aaKnown RBP25.84■■□□□ 1.73
LDB1-202ENST00000425280 KRT36O76013 467 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 MAPK9P45984 424 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 AGERQ15109 404 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 BNC2Q6ZN30 1099 aaPredicted RBP25.84■■□□□ 1.73
LDB1-202ENST00000425280 RALGPS2Q86X27 583 aaPredicted RBP25.84■■□□□ 1.73
LDB1-202ENST00000425280 MYLK4Q86YV6 388 aaPredicted RBP25.84■■□□□ 1.73
LDB1-202ENST00000425280 FNDC5Q8NAU1 212 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 FOPNLQ96NB1 174 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 SLC29A3Q9BZD2 475 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 BRINP2Q9C0B6 783 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 SLC6A17Q9H1V8 727 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 TRPV5Q9NQA5 729 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 FARSBQ9NSD9 589 aaKnown RBP25.84■■□□□ 1.73
LDB1-202ENST00000425280 DNAJC11Q9NVH1 559 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 FBXL12Q9NXK8 326 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 ZFR2Q9UPR6 939 aaKnown RBP25.84■■□□□ 1.73
LDB1-202ENST00000425280 PCYT1BQ9Y5K3 369 aaPredicted RBP25.84■■□□□ 1.73
LDB1-202ENST00000425280 MANBAO00462 879 aa25.83■■□□□ 1.73
LDB1-202ENST00000425280 CFLARO15519 480 aa25.83■■□□□ 1.73
LDB1-202ENST00000425280 KLF8O95600 359 aaPredicted RBP25.83■■□□□ 1.73
LDB1-202ENST00000425280 COL9A1P20849 921 aa25.83■■□□□ 1.73
LDB1-202ENST00000425280 ITPKAP23677 461 aa25.83■■□□□ 1.73
LDB1-202ENST00000425280 DPP6P42658 865 aa25.83■■□□□ 1.73
LDB1-202ENST00000425280 PFN3P60673 137 aa25.83■■□□□ 1.73
LDB1-202ENST00000425280 CCDC124Q96CT7 223 aaKnown RBP25.83■■□□□ 1.73
LDB1-202ENST00000425280 CCDC138Q96M89 665 aa25.83■■□□□ 1.73
LDB1-202ENST00000425280 F5P12259 2224 aa25.83■■□□□ 1.73
LDB1-202ENST00000425280 C17orf113A0A1B0GUU1 675 aa25.83■■□□□ 1.72
LDB1-202ENST00000425280 A0A1W2PQF6 199 aa25.83■■□□□ 1.72
LDB1-202ENST00000425280 NR5A2O00482 541 aa25.83■■□□□ 1.72
LDB1-202ENST00000425280 PSMG1O95456 288 aa25.83■■□□□ 1.72
LDB1-202ENST00000425280 CDK3Q00526 305 aa25.83■■□□□ 1.72
LDB1-202ENST00000425280 GRIK2Q13002 908 aa25.83■■□□□ 1.72
LDB1-202ENST00000425280 NR6A1Q15406 480 aa25.83■■□□□ 1.72
LDB1-202ENST00000425280 C11orf96Q7Z7L8 435 aa25.83■■□□□ 1.72
LDB1-202ENST00000425280 KCNV2Q8TDN2 545 aa25.83■■□□□ 1.72
LDB1-202ENST00000425280 GANCQ8TET4 914 aa25.83■■□□□ 1.72
LDB1-202ENST00000425280 SLC45A3Q96JT2 553 aa25.83■■□□□ 1.72
LDB1-202ENST00000425280 LGR4Q9BXB1 951 aa25.83■■□□□ 1.72
LDB1-202ENST00000425280 MBNL1Q9NR56 388 aaKnown RBP25.83■■□□□ 1.72
LDB1-202ENST00000425280 PACSIN3Q9UKS6 424 aa25.83■■□□□ 1.72
LDB1-202ENST00000425280 MRASO14807 208 aa25.82■■□□□ 1.72
LDB1-202ENST00000425280 ULK1O75385 1050 aa25.82■■□□□ 1.72
LDB1-202ENST00000425280 HOXB2P14652 356 aa25.82■■□□□ 1.72
LDB1-202ENST00000425280 FGL2Q14314 439 aa25.82■■□□□ 1.72
LDB1-202ENST00000425280 PLA2G4EQ3MJ16 856 aa25.82■■□□□ 1.72
LDB1-202ENST00000425280 DOK6Q6PKX4 331 aa25.82■■□□□ 1.72
LDB1-202ENST00000425280 OR2L2Q8NH16 312 aa25.82■■□□□ 1.72
LDB1-202ENST00000425280 STMN2Q93045 179 aa25.82■■□□□ 1.72
LDB1-202ENST00000425280 FAM131CQ96AQ9 280 aa25.82■■□□□ 1.72
LDB1-202ENST00000425280 STOX2Q9P2F5 926 aaPredicted RBP25.82■■□□□ 1.72
LDB1-202ENST00000425280 ZNHIT2Q9UHR6 403 aa25.82■■□□□ 1.72
LDB1-202ENST00000425280 ZNF490Q9ULM2 529 aaPredicted RBP25.82■■□□□ 1.72
LDB1-202ENST00000425280 POMPQ9Y244 141 aa25.82■■□□□ 1.72
LDB1-202ENST00000425280 TNRC18O15417 2968 aaPredicted RBP25.82■■□□□ 1.72
LDB1-202ENST00000425280 C9JVG2 144 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 EMX2Q04743 252 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 GGTA1PQ4G0N0 100 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 HM13Q8TCT9 377 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 ATL1Q8WXF7 558 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 USP7Q93009 1102 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 PKP4Q99569 1192 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 SERPINI1Q99574 410 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 CIDEBQ9UHD4 219 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 PRKAB1Q9Y478 270 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 PCDHGA7Q9Y5G6 932 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 KCNE1BA0A087WTH5 132 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 CAPN3P20807 821 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 RCN1Q15293 331 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 AP5B1Q2VPB7 878 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 PDCD4Q53EL6 469 aaKnown RBP25.81■■□□□ 1.72
LDB1-202ENST00000425280 SLC44A4Q53GD3 710 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 SGO1Q5FBB7 561 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 PIGGQ5H8A4 983 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 BLOC1S3Q6QNY0 202 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 AGTRAPQ6RW13 159 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 TRIM46Q7Z4K8 759 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 SLC44A3Q8N4M1 653 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 TEX37Q96LM6 180 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 FBRSQ9HAH7 460 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 KCNK12Q9HB15 430 aa25.81■■□□□ 1.72
LDB1-202ENST00000425280 DOCK9Q9BZ29 2069 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms