RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CPZQ66K79 652 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 NADSYN1Q6IA69 706 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 CADM3Q8N126 398 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 CPA6Q8N4T0 437 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 RHOXF1Q8NHV9 184 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 MCOLN3Q8TDD5 553 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 USP7Q93009 1102 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 PITX2Q99697 317 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 DGCR6LQ9BY27 220 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 ARMC7Q9H6L4 198 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 IPPKQ9H8X2 491 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 THG1LQ9NWX6 298 aaKnown RBP14.92□□□□□ -0.02
C9orf3-204ENST00000424143 DNMT3BQ9UBC3 853 aaKnown RBP14.92□□□□□ -0.02
C9orf3-204ENST00000424143 OSGIN1Q9UJX0 560 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 PADI3Q9ULW8 664 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 SLC27A5Q9Y2P5 690 aa14.92□□□□□ -0.02
C9orf3-204ENST00000424143 MN1Q10571 1320 aaPredicted RBP14.91□□□□□ -0.02
C9orf3-204ENST00000424143 MICAL3Q7RTP6 2002 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 SLC12A8A0AV02 714 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 NCF1BA6NI72 391 aaPredicted RBP14.91□□□□□ -0.02
C9orf3-204ENST00000424143 NCF1CA8MVU1 366 aaPredicted RBP14.91□□□□□ -0.02
C9orf3-204ENST00000424143 ANKRD66B4E2M5 251 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 E5RI56 91 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 AREL1O15033 823 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 STX7O15400 261 aaKnown RBP14.91□□□□□ -0.02
C9orf3-204ENST00000424143 DUSP11O75319 330 aaKnown RBP14.91□□□□□ -0.02
C9orf3-204ENST00000424143 CCNDBP1O95273 360 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 NCF1P14598 390 aaPredicted RBP14.91□□□□□ -0.02
C9orf3-204ENST00000424143 RGS4P49798 205 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 ARHGDIAP52565 204 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 DSC1Q08554 894 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 SMARCB1Q12824 385 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 INAQ16352 499 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 UBE2UQ5VVX9 321 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 LYPLAL1Q5VWZ2 237 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 PSAPL1Q6NUJ1 521 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 CHST9Q7L1S5 443 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 PIWIL3Q7Z3Z3 882 aaKnown RBP14.91□□□□□ -0.02
C9orf3-204ENST00000424143 SNX20Q7Z614 316 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 TMEM179BQ7Z7N9 219 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 ZFP90Q8TF47 636 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 FBXO32Q969P5 355 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 RMDN1Q96DB5 314 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 ITCHQ96J02 903 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 BTBD2Q9BX70 525 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 ASPSCR1Q9BZE9 553 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 MMP27Q9H306 513 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 LRTM1Q9HBL6 345 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 SCUBE2Q9NQ36 999 aa14.91□□□□□ -0.02
C9orf3-204ENST00000424143 ABI2Q9NYB9 513 aaPredicted RBP14.91□□□□□ -0.02
C9orf3-204ENST00000424143 NDRG4Q9ULP0 352 aaKnown RBP14.91□□□□□ -0.02
C9orf3-204ENST00000424143 OR6C75A6NL08 312 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 TTC34A8MYJ7 566 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 H3BNC9 293 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 PER2O15055 1255 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 NOBOXO60393 691 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 GJB3O75712 270 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 NADKO95544 446 aaPredicted RBP14.9□□□□□ -0.02
C9orf3-204ENST00000424143 PIRTP0C851 137 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 BMP4P12644 408 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 FPR1P21462 350 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 IGFBP5P24593 272 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 RXRGP48443 463 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 MAPK10P53779 464 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 IST1P53990 364 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 FKBP1BP68106 108 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 TEKQ02763 1124 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 CLCA4Q14CN2 919 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 FAM174BQ3ZCQ3 159 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 PAN2Q504Q3 1202 aaKnown RBP14.9□□□□□ -0.02
C9orf3-204ENST00000424143 USP39Q53GS9 565 aaKnown RBP14.9□□□□□ -0.02
C9orf3-204ENST00000424143 FAM26DQ5JW98 314 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 DEPDC1Q5TB30 811 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 B3GNT8Q7Z7M8 397 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 TMEM132CQ8N3T6 1108 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 TESCQ96BS2 214 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 FAM120BQ96EK7 910 aaKnown RBP14.9□□□□□ -0.02
C9orf3-204ENST00000424143 HEPHQ9BQS7 1158 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 FAM126AQ9BYI3 521 aaPredicted RBP14.9□□□□□ -0.02
C9orf3-204ENST00000424143 CD244Q9BZW8 370 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 TNKS2Q9H2K2 1166 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 IKZF5Q9H5V7 419 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 ZNF408Q9H9D4 720 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 IL1RAPQ9NPH3 570 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 LATS2Q9NRM7 1088 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 FLRT1Q9NZU1 646 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 FKBPLQ9UIM3 349 aa14.9□□□□□ -0.02
C9orf3-204ENST00000424143 TTC3P53804 2025 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 ANKRD12Q6UB98 2062 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 TAPBPO15533 448 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 RGS10O43665 173 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 ACSL4O60488 711 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 CLDN11O75508 207 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 SEMG1P04279 462 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 ITGB1P05556 798 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 PTPN2P17706 415 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 DGKAP23743 735 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 DNAJA1P31689 397 aaKnown RBP14.89□□□□□ -0.03
C9orf3-204ENST00000424143 TRPC1P48995 793 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 PXNP49023 591 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms