RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 BBOF1Q8ND07 529 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 SLC35G2Q8TBE7 412 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 FBXO25Q8TCJ0 367 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 MAML1Q92585 1016 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 ARHGEF26Q96DR7 871 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 BMFQ96LC9 184 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 CCDC140Q96MF4 163 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 PEBP4Q96S96 227 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 AGAP2Q99490 1192 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 SNRNP25Q9BV90 132 aaKnown RBP5.26□□□□□ -1.57
LINC00342-201ENST00000412393 AP1M1Q9BXS5 423 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 CALN1Q9BXU9 219 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 PACSIN1Q9BY11 444 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 SLC17A9Q9BYT1 436 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 SLC39A8Q9C0K1 460 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 MRPL47Q9HD33 250 aaKnown RBP5.26□□□□□ -1.57
LINC00342-201ENST00000412393 KLHL11Q9NVR0 708 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 IL1RAPL1Q9NZN1 696 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 DKK3Q9UBP4 350 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 LHX3Q9UBR4 397 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 UBA2Q9UBT2 640 aaPredicted RBP5.26□□□□□ -1.57
LINC00342-201ENST00000412393 CIDEBQ9UHD4 219 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 IPO11Q9UI26 975 aaKnown RBP5.26□□□□□ -1.57
LINC00342-201ENST00000412393 TMCO1Q9UM00 188 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 PCDHB10Q9UN67 800 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 PCDHGA1Q9Y5H4 931 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 GMEB1Q9Y692 573 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 IGF2RP11717 2491 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 AKAP13Q12802 2813 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 URB1O60287 2271 aaKnown RBP5.26□□□□□ -1.57
LINC00342-201ENST00000412393 KIF26BQ2KJY2 2108 aa5.26□□□□□ -1.57
LINC00342-201ENST00000412393 ZFC3H1O60293 1989 aaKnown RBP5.25□□□□□ -1.57
LINC00342-201ENST00000412393 TMEM120BA0PK00 339 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 FAM149AA5PLN7 773 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 MAGEA13PA6NCF6 341 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 POM121BA6NF01 834 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 TCP11X1B4DZS4 312 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 J3KR12 359 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 DFFAO00273 331 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 FPGTO14772 594 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 NDC80O14777 642 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 AREL1O15033 823 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 RAD51BO15315 384 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 INSIG1O15503 277 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 FFAR2O15552 330 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 PRAMEF11O60813 436 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 SMIM24O75264 130 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 LRCH4O75427 683 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 TM7SF2O76062 418 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 PIGNO95427 931 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 TGDSO95455 350 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 ASMTLO95671 621 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 CDK4P11802 303 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 JUPP14923 745 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 ERCC2P18074 760 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 XPAP23025 273 aaPredicted RBP5.25□□□□□ -1.57
LINC00342-201ENST00000412393 HOXC12P31275 282 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 PCK1P35558 622 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 COILP38432 576 aaPredicted RBP5.25□□□□□ -1.57
LINC00342-201ENST00000412393 VHLP40337 213 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 RABIFP47224 123 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 GIPRP48546 466 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 ACADVLP49748 655 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 ZNF135P52742 658 aaPredicted RBP5.25□□□□□ -1.57
LINC00342-201ENST00000412393 PLTPP55058 493 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 HNRNPKP61978 463 aaKnown RBP eCLIP5.25□□□□□ -1.57
LINC00342-201ENST00000412393 XIAPP98170 497 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 MGAT5Q09328 741 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 CUL3Q13618 768 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 GRM3Q14832 879 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 KRT72Q14CN4 511 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 ACAP1Q15027 740 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 SIX1Q15475 284 aaPredicted RBP5.25□□□□□ -1.57
LINC00342-201ENST00000412393 ZNF542PQ5EBM4 170 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 LRRC73Q5JTD7 316 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 THEMIS2Q5TEJ8 643 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 CGB2Q6NT52 195 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 CCDC81Q6ZN84 652 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 RFX8Q6ZV50 586 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 CYP4V2Q6ZWL3 525 aaPredicted RBP5.25□□□□□ -1.57
LINC00342-201ENST00000412393 DAAM2Q86T65 1068 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 TMPRSS12Q86WS5 348 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 MARCH9Q86YJ5 346 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 PSTKQ8IV42 348 aaKnown RBP5.25□□□□□ -1.57
LINC00342-201ENST00000412393 SLC22A18ASQ8N1D0 253 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 SLC25A45Q8N413 288 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 UBL4BQ8N7F7 174 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 PAF1Q8N7H5 531 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 DENND6BQ8NEG7 585 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 FAM81AQ8TBF8 368 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 TEKT4Q8WW24 435 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 ASB12Q8WXK4 309 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 DNAJC9Q8WXX5 260 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 RBM41Q96IZ5 413 aaKnown RBP5.25□□□□□ -1.57
LINC00342-201ENST00000412393 CELF6Q96J87 481 aaKnown RBP5.25□□□□□ -1.57
LINC00342-201ENST00000412393 EXOC2Q96KP1 924 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 LENG8Q96PV6 779 aaPredicted RBP5.25□□□□□ -1.57
LINC00342-201ENST00000412393 KLF6Q99612 283 aaPredicted RBP5.25□□□□□ -1.57
LINC00342-201ENST00000412393 CCDC77Q9BR77 488 aa5.25□□□□□ -1.57
LINC00342-201ENST00000412393 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms