RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 OR8K5Q8NH50 307 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 FLVCR1-AS1Q8TAF5 88 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 CT55Q8WUE5 264 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 ASZ1Q8WWH4 475 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 BIRC8Q96P09 236 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 OR2A14Q96R47 310 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 NAP1L3Q99457 506 aaPredicted RBP17.14■□□□□ 0.33
LSM5-204ENST00000409909 TSSK1BQ9BXA7 367 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 SNX12Q9UMY4 172 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 PIPSLA2A3N6 862 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 USP27XA6NNY8 438 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 KATNA1O75449 491 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 NDUFS3O75489 264 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 UGT2B7P16662 529 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 TCN2P20062 427 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 RPS3P23396 243 aaKnown RBP eCLIP17.13■□□□□ 0.33
LSM5-204ENST00000409909 SARNPP82979 210 aaKnown RBP17.13■□□□□ 0.33
LSM5-204ENST00000409909 CRTC2Q53ET0 693 aaPredicted RBP17.13■□□□□ 0.33
LSM5-204ENST00000409909 DNAJC21Q5F1R6 531 aaKnown RBP17.13■□□□□ 0.33
LSM5-204ENST00000409909 ZNF789Q5FWF6 425 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 CTSL3PQ5NE16 218 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 PTRHD1Q6GMV3 140 aaKnown RBP17.13■□□□□ 0.33
LSM5-204ENST00000409909 C16orf46Q6P387 395 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 ZNF605Q86T29 641 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 TMEM126BQ8IUX1 230 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 MCUQ8NE86 351 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 OR1L3Q8NH93 324 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 CATSPER2Q96P56 530 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 RUFY1Q96T51 708 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 MENTQ9BUN1 341 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 LATS2Q9NRM7 1088 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 OR6C2Q9NZP2 312 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 PCDHGA6Q9Y5G7 932 aa17.13■□□□□ 0.33
LSM5-204ENST00000409909 SNRNP200O75643 2136 aaKnown RBP17.12■□□□□ 0.33
LSM5-204ENST00000409909 SEC16AO15027 2179 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 B8ZZF3 427 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 TMEM150CB9EJG8 249 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 GOLGA8MH3BSY2 632 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 KIF5CO60282 957 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 PHF2O75151 1096 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 APOA4P06727 396 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 FURINP09958 794 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 MSL3P1P0C860 447 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 MLNP12872 115 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 PLA2G2AP14555 144 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 PEBP1P30086 187 aaKnown RBP17.12■□□□□ 0.33
LSM5-204ENST00000409909 EIF3BP55884 814 aaKnown RBP17.12■□□□□ 0.33
LSM5-204ENST00000409909 MC1RQ01726 317 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 GPS2Q13227 327 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 DNASE1L3Q13609 305 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 GRB7Q14451 532 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 ZIC1Q15915 447 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 TYSND1Q2T9J0 566 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 DEFB109BQ30KR1 87 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 KIAA0930Q6ICG6 404 aaPredicted RBP17.12■□□□□ 0.33
LSM5-204ENST00000409909 MRNIPQ6NTE8 343 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 CDHR3Q6ZTQ4 885 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 LRRC6Q86X45 466 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 AGGF1Q8N302 714 aaeCLIP17.12■□□□□ 0.33
LSM5-204ENST00000409909 OTUD6BQ8N6M0 293 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 LMNTD1Q8N9Z9 388 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 CFAP61Q8NHU2 1237 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 LPGAT1Q92604 370 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 SERPINB12Q96P63 405 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 FAM60AQ9NP50 221 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 STARD5Q9NSY2 213 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 GEMIN8Q9NWZ8 242 aaKnown RBP17.12■□□□□ 0.33
LSM5-204ENST00000409909 IL1RAPL1Q9NZN1 696 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 CIDEBQ9UHD4 219 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 GNPTGQ9UJJ9 305 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 KCND3Q9UK17 655 aa17.12■□□□□ 0.33
LSM5-204ENST00000409909 SDR42E2A6NKP2 422 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 CES2O00748 559 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 HCRTR1O43613 425 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 CPNE3O75131 537 aaKnown RBP17.11■□□□□ 0.33
LSM5-204ENST00000409909 PKLRP30613 574 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 FMO4P31512 558 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 CCR10P46092 362 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 POLE2P56282 527 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 NFATC3Q12968 1075 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 ERV3-1Q14264 604 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 KYNUQ16719 465 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 ANKRD20A4Q4UJ75 823 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 PLEKHS1Q5SXH7 462 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 ARMC3Q5W041 872 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 LCN10Q6JVE6 187 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 CASC4Q6P4E1 433 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 ZNF517Q6ZMY9 492 aaPredicted RBP17.11■□□□□ 0.33
LSM5-204ENST00000409909 SDCCAG8Q86SQ7 713 aaPredicted RBP17.11■□□□□ 0.33
LSM5-204ENST00000409909 NAT8LQ8N9F0 302 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 LINC01555Q8NAE3 123 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 TCF12Q99081 682 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 SYTL2Q9HCH5 934 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 XAB2Q9HCS7 855 aaKnown RBP17.11■□□□□ 0.33
LSM5-204ENST00000409909 PCDHB3Q9Y5E6 796 aa17.11■□□□□ 0.33
LSM5-204ENST00000409909 FAM237BA0A1B0GVD1 139 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 C21orf140B9A014 251 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 CREG1O75629 220 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 MAGEA3P43357 314 aa17.1■□□□□ 0.33
LSM5-204ENST00000409909 FNTAP49354 379 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms