RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 RAB6BQ9NRW1 208 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 PAK5Q9P286 719 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 TDRKHQ9Y2W6 561 aaKnown RBP14.27□□□□□ -0.13
CBX3-203ENST00000409747 AP1M2Q9Y6Q5 423 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 HECTD1Q9ULT8 2610 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 K7EM74 188 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 GOT2P00505 430 aaKnown RBP14.26□□□□□ -0.13
CBX3-203ENST00000409747 RPN2P04844 631 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 CHRM5P08912 532 aaPredicted RBP14.26□□□□□ -0.13
CBX3-203ENST00000409747 PVRP15151 417 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 UGT2B7P16662 529 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 PRAMEP78395 509 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 ACVR1Q04771 509 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 BRD3Q15059 726 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 NCF4Q15080 339 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 IGFBP7Q16270 282 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 FASTKD1Q53R41 847 aaKnown RBP14.26□□□□□ -0.13
CBX3-203ENST00000409747 DNAJC21Q5F1R6 531 aaKnown RBP14.26□□□□□ -0.13
CBX3-203ENST00000409747 PRAMEF17Q5VTA0 474 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 FAM198BQ6UWH4 519 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 PPHLN1Q8NEY8 458 aaKnown RBP14.26□□□□□ -0.13
CBX3-203ENST00000409747 OR6P1Q8NGX9 317 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 OR4L1Q8NH43 312 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 ADAMTS17Q8TE56 1095 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 SGSM3Q96HU1 749 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 ANAPC5Q9UJX4 755 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 PCDHGB7Q9Y5F8 929 aa14.26□□□□□ -0.13
CBX3-203ENST00000409747 A0A0J9YY10 115 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 ZNF749O43361 778 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 APRTP07741 180 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 CD63P08962 238 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 PTGIRP43119 386 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 KIR2DS3Q14952 304 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 CPZQ66K79 652 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 MICALCLQ6ZW33 695 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 GAS2L3Q86XJ1 694 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 RAB43Q86YS6 212 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 ASZ1Q8WWH4 475 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 MIB2Q96AX9 1013 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 OR2A14Q96R47 310 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 KLHL25Q9H0H3 589 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 CASS4Q9NQ75 786 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 GUCA1BQ9UMX6 200 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 SRPK3Q9UPE1 567 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 TCAF1Q9Y4C2 921 aa14.25□□□□□ -0.13
CBX3-203ENST00000409747 BHMG1C9JSJ3 638 aaPredicted RBP14.24□□□□□ -0.13
CBX3-203ENST00000409747 AP3B1O00203 1094 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 OR2B3O76000 313 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 TMEM63AO94886 807 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 CCL11P51671 97 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 RRADP55042 308 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 SLC5A12Q1EHB4 618 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 COLEC12Q5KU26 742 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 LCN10Q6JVE6 187 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 C4orf22Q6V702 233 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 MED25Q71SY5 747 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 HPS6Q86YV9 775 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 SLC22A15Q8IZD6 547 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 TMEM102Q8N9M5 508 aaPredicted RBP14.24□□□□□ -0.13
CBX3-203ENST00000409747 PROKR1Q8TCW9 393 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 C1orf54Q8WWF1 131 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 IP6K3Q96PC2 410 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 NRTNQ99748 197 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 MLXIPLQ9NP71 852 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 ZNF451Q9Y4E5 1061 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 OR1I1O60431 355 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 PDGFAP04085 211 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 APOA4P06727 396 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 CAPN1P07384 714 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 CD97P48960 835 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 TTPAP49638 278 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 RAB28P51157 221 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 CHAF1BQ13112 559 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 UBAP2LQ14157 1087 aaKnown RBP14.24□□□□□ -0.13
CBX3-203ENST00000409747 TMED2Q15363 201 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 RPS6KA1Q15418 735 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 PTCHD3Q3KNS1 767 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 PAPD7Q5XG87 772 aaKnown RBP14.24□□□□□ -0.13
CBX3-203ENST00000409747 RHBDD2Q6NTF9 364 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 TRIM73Q86UV7 250 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 SLC22A18Q96BI1 424 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 CARD6Q9BX69 1037 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 EIF2B3Q9NR50 452 aaKnown RBP14.24□□□□□ -0.13
CBX3-203ENST00000409747 CATSPERZQ9NTU4 200 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 SLC2A6Q9UGQ3 507 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 GPN3Q9UHW5 284 aaPredicted RBP14.24□□□□□ -0.13
CBX3-203ENST00000409747 PLAAQ9Y263 795 aa14.24□□□□□ -0.13
CBX3-203ENST00000409747 RELNP78509 3460 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 ISM1B1AKI9 464 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 CEACAM4O75871 244 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 GRIA1P42261 906 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 HSPA14Q0VDF9 509 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 SNX1Q13596 522 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 CCNG2Q16589 344 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 PCID2Q5JVF3 399 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 TLDC1Q6P9B6 456 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 UNC5DQ6UXZ4 953 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 NAPRTQ6XQN6 538 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 ZNF534Q76KX8 674 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 DCUN1D3Q8IWE4 304 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms