RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 NMBRP28336 390 aa18.66■□□□□ 0.58
SMARCB1-204ENST00000407422 PTPN4P29074 926 aa18.66■□□□□ 0.58
SMARCB1-204ENST00000407422 SHMT2P34897 504 aa18.66■□□□□ 0.58
SMARCB1-204ENST00000407422 TERF1P54274 439 aa18.66■□□□□ 0.58
SMARCB1-204ENST00000407422 HSPA14Q0VDF9 509 aa18.66■□□□□ 0.58
SMARCB1-204ENST00000407422 PLEKHS1Q5SXH7 462 aa18.66■□□□□ 0.58
SMARCB1-204ENST00000407422 KRT222Q8N1A0 295 aa18.66■□□□□ 0.58
SMARCB1-204ENST00000407422 FLVCR1-AS1Q8TAF5 88 aa18.66■□□□□ 0.58
SMARCB1-204ENST00000407422 OR2A14Q96R47 310 aa18.66■□□□□ 0.58
SMARCB1-204ENST00000407422 AP1M1Q9BXS5 423 aa18.66■□□□□ 0.58
SMARCB1-204ENST00000407422 GPR87Q9BY21 358 aa18.66■□□□□ 0.58
SMARCB1-204ENST00000407422 FAM60AQ9NP50 221 aa18.66■□□□□ 0.58
SMARCB1-204ENST00000407422 POLG2Q9UHN1 485 aa18.66■□□□□ 0.58
SMARCB1-204ENST00000407422 FLNCQ14315 2725 aa18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 MEN1O00255 615 aa18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 CD3EAPO15446 510 aaKnown RBP18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 HCRTR1O43613 425 aa18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 CHRM5P08912 532 aaPredicted RBP18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 MSL3P1P0C860 447 aa18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 MGAT1P26572 445 aa18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 RORAP35398 523 aa18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 PLOD1Q02809 727 aaPredicted RBP18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 TRIP13Q15645 432 aaPredicted RBP18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 ZIC1Q15915 447 aa18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 CES3Q6UWW8 571 aa18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 C4orf22Q6V702 233 aa18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 SLC22A15Q8IZD6 547 aa18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 CPT1BQ92523 772 aa18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 CLIP3Q96DZ5 547 aa18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 IL22Q9GZX6 179 aa18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 ANAPC5Q9UJX4 755 aa18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 TTC7AQ9ULT0 858 aaPredicted RBP18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 CCDC88CQ9P219 2028 aa18.65■□□□□ 0.58
SMARCB1-204ENST00000407422 GPC4O75487 556 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 WISP1O95388 367 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 RECKO95980 971 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 KLK3P07288 261 aaPredicted RBP18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 CYP2A7P20853 494 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 PPARGP37231 505 aaPredicted RBP18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 NPY2RP49146 381 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 RPS15P62841 145 aaKnown RBP18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 IL10RAQ13651 578 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 AARS2Q5JTZ9 985 aaKnown RBP18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 FAM69BQ5VUD6 431 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 DSELQ8IZU8 1212 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 LMNTD1Q8N9Z9 388 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 LRFN5Q96NI6 719 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 CARD6Q9BX69 1037 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 ACTR5Q9H9F9 607 aaPredicted RBP18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 SYTL2Q9HCH5 934 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 PCMTD2Q9NV79 361 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 SYBUQ9NX95 663 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 OR6C2Q9NZP2 312 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 BFARQ9NZS9 450 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 CIDEBQ9UHD4 219 aa18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 FARSAQ9Y285 508 aaKnown RBP18.64■□□□□ 0.57
SMARCB1-204ENST00000407422 F8W8V4 182 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 K7EM74 188 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 PRMT5O14744 637 aaPredicted RBP18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 MAP3K7O43318 606 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 NR1D1P20393 614 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 ARNTP27540 789 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 PEBP1P30086 187 aaKnown RBP18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 TTPAP49638 278 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 VPS41P49754 854 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 IZUMO3Q5VZ72 239 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 C19orf47Q8N9M1 422 aaKnown RBP18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 CFAP61Q8NHU2 1237 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 ASZ1Q8WWH4 475 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 MFSD3Q96ES6 412 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 SERTAD3Q9UJW9 196 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 MAN2B2Q9Y2E5 1009 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 TNRC6AQ8NDV7 1962 aaKnown RBP18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 GOLGA8KD6RF30 607 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 GOLGA8TH3BQL2 631 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 DNAJB5O75953 348 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 AOAHP28039 575 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 ITGA1P56199 1179 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 UGT8Q16880 541 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 DEFB110Q30KQ9 67 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 PTCHD3Q3KNS1 767 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 DNAJC21Q5F1R6 531 aaKnown RBP18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 COLEC12Q5KU26 742 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 TTC27Q6P3X3 843 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 LRRC8BQ6P9F7 803 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 SYVN1Q86TM6 617 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 HOOK3Q86VS8 718 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 FAM20CQ8IXL6 584 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 MS4A14Q96JA4 679 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 KIFC1Q9BW19 673 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 TSSK1BQ9BXA7 367 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 P2RY12Q9H244 342 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 HOMER3Q9NSC5 361 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 TP53TG5Q9Y2B4 290 aa18.63■□□□□ 0.57
SMARCB1-204ENST00000407422 ZNF749O43361 778 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 AVILO75366 819 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 VAPBO95292 243 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 APOA4P06727 396 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 CTSBP07858 339 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 TPSB2P20231 275 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms