RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 KLHL24Q6TFL4 600 aa13.12□□□□□ -0.31
SNED1-205ENST00000405547 DNAAF2Q9NVR5 837 aaKnown RBP13.12□□□□□ -0.31
SNED1-205ENST00000405547 ZNF879B4DU55 563 aa13.12□□□□□ -0.31
SNED1-205ENST00000405547 CACNB4O00305 520 aaPredicted RBP13.12□□□□□ -0.31
SNED1-205ENST00000405547 AKR1D1P51857 326 aa13.12□□□□□ -0.31
SNED1-205ENST00000405547 KLF1Q13351 362 aaPredicted RBP13.12□□□□□ -0.31
SNED1-205ENST00000405547 ZNF433Q8N7K0 673 aaPredicted RBP13.12□□□□□ -0.31
SNED1-205ENST00000405547 PIWIL1Q96J94 861 aaKnown RBP13.12□□□□□ -0.31
SNED1-205ENST00000405547 KCNS3Q9BQ31 491 aa13.12□□□□□ -0.31
SNED1-205ENST00000405547 TRIM2Q9C040 744 aa13.12□□□□□ -0.31
SNED1-205ENST00000405547 TBCCD1Q9NVR7 557 aa13.12□□□□□ -0.31
SNED1-205ENST00000405547 PRAMEF33A0A0G2JMD5 474 aa13.12□□□□□ -0.31
SNED1-205ENST00000405547 PRAMEF10O60809 474 aa13.12□□□□□ -0.31
SNED1-205ENST00000405547 PSKH1P11801 424 aa13.12□□□□□ -0.31
SNED1-205ENST00000405547 DNAJB13P59910 316 aa13.12□□□□□ -0.31
SNED1-205ENST00000405547 RANBP3LQ86VV4 465 aaPredicted RBP13.12□□□□□ -0.31
SNED1-205ENST00000405547 ATG10Q9H0Y0 220 aa13.12□□□□□ -0.31
SNED1-205ENST00000405547 MRM3Q9HC36 420 aaKnown RBP13.12□□□□□ -0.31
SNED1-205ENST00000405547 SLC17A6Q9P2U8 582 aa13.12□□□□□ -0.31
SNED1-205ENST00000405547 A0A1W2PQ72 361 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 ZNF487B1APH4 448 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 ADAMTS3O15072 1205 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 PPP2R2BQ00005 443 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 BNIP3Q12983 259 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 ADNP2Q6IQ32 1131 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 ZNF773Q6PK81 442 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 SNX33Q8WV41 574 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 FLRT1Q9NZU1 646 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 IQCMA0A1B0GVH7 501 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 ABCB7O75027 752 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 GSTT2BP0CG30 244 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 NFKB2Q00653 900 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 C17orf50Q8WW18 174 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 DUSP26Q9BV47 211 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 FAM83DQ9H4H8 585 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 UPB1Q9UBR1 384 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 POFUT2Q9Y2G5 429 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 ARL5AQ9Y689 179 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 PTPRJQ12913 1337 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 DLX3O60479 287 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 SLC15A1P46059 708 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 VBP1P61758 197 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 TMBIM1Q969X1 311 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 B3GALT6Q96L58 329 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 KCTD7Q96MP8 289 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 SLC39A3Q9BRY0 314 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 BCO2Q9BYV7 579 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 TTYH1Q9H313 450 aaPredicted RBP13.11□□□□□ -0.31
SNED1-205ENST00000405547 ELL3Q9HB65 397 aaPredicted RBP13.11□□□□□ -0.31
SNED1-205ENST00000405547 THUMPD1Q9NXG2 353 aaKnown RBP13.11□□□□□ -0.31
SNED1-205ENST00000405547 TMED5Q9Y3A6 229 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 SNX10Q9Y5X0 201 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 NEMP2A6NFY4 417 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 ACOX3O15254 700 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 POP4O95707 220 aaKnown RBP13.11□□□□□ -0.31
SNED1-205ENST00000405547 YES1P07947 543 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 GSK3BP49841 420 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 CLCN4P51793 760 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 RAPSNQ13702 412 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 THOC7Q6I9Y2 204 aaKnown RBP13.11□□□□□ -0.31
SNED1-205ENST00000405547 NIPAL1Q6NVV3 410 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 PAQR3Q6TCH7 311 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 SNX20Q7Z614 316 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 CLEC4CQ8WTT0 213 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 PPP1R13LQ8WUF5 828 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 FUBP3Q96I24 572 aaKnown RBP eCLIP13.11□□□□□ -0.31
SNED1-205ENST00000405547 NKIRAS2Q9NYR9 191 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 ZNF224Q9NZL3 707 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 GABRR2P28476 465 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 CDH15P55291 814 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 ZBTB8BQ8NAP8 495 aaPredicted RBP13.11□□□□□ -0.31
SNED1-205ENST00000405547 AASSQ9UDR5 926 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 SEC14L4Q9UDX3 406 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 ZFP37Q9Y6Q3 630 aaPredicted RBP13.11□□□□□ -0.31
SNED1-205ENST00000405547 CLIC1O00299 241 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 POU2F1P14859 743 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 VARSP26640 1264 aaKnown RBP13.11□□□□□ -0.31
SNED1-205ENST00000405547 FRRS1Q6ZNA5 592 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 ZNF599Q96NL3 588 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 MNTQ99583 582 aa13.11□□□□□ -0.31
SNED1-205ENST00000405547 TCEAL5Q5H9L2 206 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 OXR1Q8N573 874 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 OR7D4Q8NG98 312 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 GEMIN6Q8WXD5 167 aaKnown RBP13.1□□□□□ -0.31
SNED1-205ENST00000405547 EMID1Q96A84 441 aaPredicted RBP13.1□□□□□ -0.31
SNED1-205ENST00000405547 PREBQ9HCU5 417 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 SNTG1Q9NSN8 517 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 COLEC10Q9Y6Z7 277 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 SNED1Q8TER0 1413 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 HLA-DQB2P05538 268 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 SLC6A4P31645 630 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 GRIA1P42261 906 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 RAB2AP61019 212 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 MSANTD2Q6P1R3 559 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 EXOSC8Q96B26 276 aaKnown RBP13.1□□□□□ -0.31
SNED1-205ENST00000405547 C12orf43Q96C57 262 aaKnown RBP13.1□□□□□ -0.31
SNED1-205ENST00000405547 CLIP3Q96DZ5 547 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 POLR3BQ9NW08 1133 aaPredicted RBP13.1□□□□□ -0.31
SNED1-205ENST00000405547 ATRNL1Q5VV63 1379 aa13.1□□□□□ -0.31
SNED1-205ENST00000405547 XKRYO14609 159 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms