RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 TFB2MQ9H5Q4 396 aaKnown RBP20.74■□□□□ 0.91
FXN-202ENST00000396364 NMRAL1Q9HBL8 299 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.74■□□□□ 0.91
FXN-202ENST00000396364 LNPEPQ9UIQ6 1025 aa20.74■□□□□ 0.91
FXN-202ENST00000396364 CCDC189A1A4V9 331 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 HMX2A2RU54 273 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 MT-ND3P03897 115 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 ALDOAP04075 364 aaKnown RBP20.73■□□□□ 0.91
FXN-202ENST00000396364 C2P06681 752 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 LTA4HP09960 611 aaKnown RBP20.73■□□□□ 0.91
FXN-202ENST00000396364 SLC35E2BP0CK96 405 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 COL6A2P12110 1019 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 AMD1P17707 334 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 HSD17B2P37059 387 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 SIM1P81133 766 aaPredicted RBP20.73■□□□□ 0.91
FXN-202ENST00000396364 PRKG2Q13237 762 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 PUM1Q14671 1186 aaKnown RBP eCLIP20.73■□□□□ 0.91
FXN-202ENST00000396364 ARMC6Q6NXE6 501 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 CYHR1Q6ZMK1 362 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 SPRED1Q7Z699 444 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 LCA5Q86VQ0 697 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 OR2W6PQ8NHA6 318 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 VPS11Q9H270 941 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 SRMSQ9H3Y6 488 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 PARVBQ9HBI1 364 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 CTNNAL1Q9UBT7 734 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 NFS1Q9Y697 457 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 PIEZO1Q92508 2521 aa20.73■□□□□ 0.91
FXN-202ENST00000396364 GFYI3L273 518 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 MATN2O00339 956 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 BTN3A1O00481 513 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 UBXN7O94888 489 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 PRKAA1Q13131 559 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 CSHL1Q14406 222 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 TSNAXIP1Q2TAA8 658 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 KRT71Q3SY84 523 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 LRIG3Q6UXM1 1119 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 FRA10AC1Q70Z53 315 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 OOSP2Q86WS3 158 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 Q8N9G6 341 aaPredicted RBP20.72■□□□□ 0.91
FXN-202ENST00000396364 OR52E1Q8NGJ3 308 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 PKNOX2Q96KN3 472 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 UBXN10Q96LJ8 280 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 SLC12A9Q9BXP2 914 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 DLL3Q9NYJ7 618 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 SPATA7Q9P0W8 599 aa20.72■□□□□ 0.91
FXN-202ENST00000396364 NOVA2Q9UNW9 492 aaKnown RBP20.72■□□□□ 0.91
FXN-202ENST00000396364 GOLGA6L10A6NI86 522 aa20.71■□□□□ 0.91
FXN-202ENST00000396364 KCNK5O95279 499 aa20.71■□□□□ 0.91
FXN-202ENST00000396364 WISP3O95389 354 aaPredicted RBP20.71■□□□□ 0.91
FXN-202ENST00000396364 TSPAN12O95859 305 aa20.71■□□□□ 0.91
FXN-202ENST00000396364 MAGEA12P43365 314 aa20.71■□□□□ 0.91
FXN-202ENST00000396364 RAB28P51157 221 aa20.71■□□□□ 0.91
FXN-202ENST00000396364 AP1S2P56377 157 aa20.71■□□□□ 0.91
FXN-202ENST00000396364 SPIDRQ14159 915 aa20.71■□□□□ 0.91
FXN-202ENST00000396364 CCDC157Q569K6 752 aa20.71■□□□□ 0.91
FXN-202ENST00000396364 PERM1Q5SV97 790 aa20.71■□□□□ 0.91
FXN-202ENST00000396364 TMEM207Q6UWW9 146 aa20.71■□□□□ 0.91
FXN-202ENST00000396364 AMIGO1Q86WK6 493 aa20.71■□□□□ 0.91
FXN-202ENST00000396364 LRRN3Q9H3W5 708 aa20.71■□□□□ 0.91
FXN-202ENST00000396364 SYNDIG1Q9H7V2 258 aa20.71■□□□□ 0.91
FXN-202ENST00000396364 OR6C2Q9NZP2 312 aa20.71■□□□□ 0.91
FXN-202ENST00000396364 RUVBL2Q9Y230 463 aaKnown RBP20.71■□□□□ 0.91
FXN-202ENST00000396364 IGHV1OR21-1A0A087WYE8 117 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 UQCRHLA0A096LP55 91 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 KLHL2O95198 593 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 CPNE6O95741 557 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 SYF2O95926 243 aaKnown RBP20.7■□□□□ 0.9
FXN-202ENST00000396364 RPLP0P05388 317 aaKnown RBP20.7■□□□□ 0.9
FXN-202ENST00000396364 PROS1P07225 676 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 UQCRHP07919 91 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 H2AFXP16104 143 aaPredicted RBP20.7■□□□□ 0.9
FXN-202ENST00000396364 BDKRB1P46663 353 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 OR1D5P58170 312 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 ARHGAP19Q14CB8 494 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 AMZ1Q400G9 498 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 ZNF761Q86XN6 746 aaPredicted RBP20.7■□□□□ 0.9
FXN-202ENST00000396364 PLXDC1Q8IUK5 500 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 IQCKQ8N0W5 287 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 OR9A1PQ8NGU1 263 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 STAG3L4Q8TBR4 150 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 ANKRD49Q8WVL7 239 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 ATL1Q8WXF7 558 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 CCDC138Q96M89 665 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 ZIM3Q96PE6 472 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 GFM1Q96RP9 751 aaKnown RBP20.7■□□□□ 0.9
FXN-202ENST00000396364 TBC1D10AQ9BXI6 508 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 STMN4Q9H169 189 aaPredicted RBP20.7■□□□□ 0.9
FXN-202ENST00000396364 LGALS13Q9UHV8 139 aa20.7■□□□□ 0.9
FXN-202ENST00000396364 PCNX2A6NKB5 2137 aa20.69■□□□□ 0.9
FXN-202ENST00000396364 SPAARA0A1B0GVQ0 90 aa20.69■□□□□ 0.9
FXN-202ENST00000396364 ARHGEF33A8MVX0 844 aa20.69■□□□□ 0.9
FXN-202ENST00000396364 S100BP04271 92 aaPredicted RBP20.69■□□□□ 0.9
FXN-202ENST00000396364 FTH1P19P0C7X4 201 aa20.69■□□□□ 0.9
FXN-202ENST00000396364 MYZAPP0CAP1 466 aa20.69■□□□□ 0.9
FXN-202ENST00000396364 CD1DP15813 335 aa20.69■□□□□ 0.9
FXN-202ENST00000396364 HOXD11P31277 338 aaPredicted RBP20.69■□□□□ 0.9
FXN-202ENST00000396364 PGGT1BP53609 377 aa20.69■□□□□ 0.9
FXN-202ENST00000396364 SQSTM1Q13501 440 aa20.69■□□□□ 0.9
FXN-202ENST00000396364 CASP8Q14790 479 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms