RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 TMED6Q8WW62 240 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 MTBPQ96DY7 904 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 RAD9AQ99638 391 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 VN1R1Q9GZP7 353 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 MINDY3Q9H8M7 445 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 MRPL44Q9H9J2 332 aaKnown RBP4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 SMARCAL1Q9NZC9 954 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 LEF1Q9UJU2 399 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 DLGAP4Q9Y2H0 992 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 GPRASP1Q5JY77 1395 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 PCDH11YQ9BZA8 1340 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 A0A1W2PRV1 198 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 LRRD1A4D1F6 860 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 YDJCA8MPS7 323 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 ANKRD66B4E2M5 251 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 ZNHIT1O43257 154 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 FCGR3BO75015 233 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 PMS2P2O95744 297 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 RLN1P04808 185 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 HAPLN1P10915 354 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 EPCAMP16422 314 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 ARCN1P48444 511 aaKnown RBP4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 HMGA2P52926 109 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 PGGT1BP53609 377 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 MTCP1P56278 107 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 CLDN15P56746 228 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 GSDMDP57764 484 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 C21orf58P58505 322 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 EGR4Q05215 589 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 DSC1Q08554 894 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 TWIST1Q15672 202 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 CA9Q16790 459 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 CTU2Q2VPK5 515 aaKnown RBP4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 MDH1BQ5I0G3 518 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 CCDC158Q5M9N0 1113 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 SUSD4Q5VX71 490 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 TRNP1Q6NT89 227 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 NOTUMQ6P988 496 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 TMEM270Q6UE05 265 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 ENPP7Q6UWV6 458 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 ARHGAP22Q7Z5H3 698 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 CRYBG2Q8N1P7 616 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 OR8H1Q8NGG4 311 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 RNF128Q8TEB7 428 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 RIT1Q92963 219 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 TEKT1Q969V4 418 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 DHX58Q96C10 678 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 STAMBPL1Q96FJ0 436 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 OXNAD1Q96HP4 312 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 ATP6V0BQ99437 205 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 PI4K2AQ9BTU6 479 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 ACAT2Q9BWD1 397 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 GTPBP2Q9BX10 602 aaKnown RBP4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 SLC2A11Q9BYW1 496 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 ZNF350Q9GZX5 532 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 GAREM1Q9H706 876 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 MID1IP1Q9NPA3 183 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 SERINC1Q9NRX5 453 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 IARS2Q9NSE4 1012 aaKnown RBP4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 DNAJC17Q9NVM6 304 aaKnown RBP4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 HIF1ANQ9NWT6 349 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 STK26Q9P289 416 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 MTUS1Q9ULD2 1270 aa4.75□□□□□ -1.65
HMGB1P10-201ENST00000395823 IGLV5-37A0A075B6J1 123 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 SMIM30A4D0T7 59 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 DUXAA6NLW8 204 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 DDX39AO00148 427 aaKnown RBP4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 SLC33A1O00400 549 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 BUD23O43709 281 aaKnown RBP4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 OLFM2O95897 454 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 SLC16A8O95907 504 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 LIPFP07098 398 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 KRT19P08727 400 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 HOXC6P09630 235 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 CSF2RAP15509 400 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 RGS7P49802 495 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 NANOS3P60323 173 aaKnown RBP4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 GTF2H2Q13888 395 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 NPTX1Q15818 432 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 FAM174BQ3ZCQ3 159 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 GTF2H2CQ6P1K8 395 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 CYB5D1Q6P9G0 228 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 GET4Q7L5D6 327 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 DZIP1Q86YF9 867 aaKnown RBP4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 APCDD1Q8J025 514 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 SFRP1Q8N474 314 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 TRIML1Q8N9V2 468 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 NPEPL1Q8NDH3 523 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 OR13J1Q8NGT2 312 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 BSCL2Q96G97 398 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 AK8Q96MA6 479 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 SF3B5Q9BWJ5 86 aaKnown RBP4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 ARRDC1-AS1Q9H2J1 176 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 TMPRSS5Q9H3S3 457 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 Q9H8V8 135 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 TRPC7Q9HCX4 862 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 WNT16Q9UBV4 365 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 PCDHA7Q9UN72 937 aa4.74□□□□□ -1.65
HMGB1P10-201ENST00000395823 CKAP5Q14008 2032 aa4.73□□□□□ -1.65
HMGB1P10-201ENST00000395823 CTAGE9A4FU28 777 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms