RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 CBSP35520 551 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 GLRBP48167 497 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 SEC24CP53992 1094 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 ZXDAP98168 799 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 GBX1Q14549 363 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 NUMA1Q14980 2115 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 PCLAFQ15004 111 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 ZNF648Q5T619 568 aaPredicted RBP11.18□□□□□ -0.62
RTN1-203ENST00000395090 ZBTB2Q8N680 514 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 LKAAEAR1Q8TD35 194 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 PTERQ96BW5 349 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 CHMP6Q96FZ7 201 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 ZNF514Q96K75 400 aaPredicted RBP11.18□□□□□ -0.62
RTN1-203ENST00000395090 DHRS1Q96LJ7 313 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 OXSMQ9NWU1 459 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 MID2Q9UJV3 735 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 GPR34Q9UPC5 381 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 PIKFYVEQ9Y2I7 2098 aa11.18□□□□□ -0.62
RTN1-203ENST00000395090 TCP11X1B4DZS4 312 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 RAD51BO15315 384 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 ZBTB14O43829 449 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 DLX3O60479 287 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 CDK14O94921 469 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 SLITRK5O94991 958 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 ITGB2P05107 769 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 HOXC4P09017 264 aaPredicted RBP11.17□□□□□ -0.62
RTN1-203ENST00000395090 TFEBP19484 476 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 PRLHRP49683 370 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 CTSCP53634 463 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 PPP2CBP62714 309 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 PPP2CAP67775 309 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 IRX4P78413 519 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 CDK3Q00526 305 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 TTLL9Q3SXZ7 439 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 ZNF658BQ4V348 819 aaPredicted RBP11.17□□□□□ -0.62
RTN1-203ENST00000395090 BCL7AQ4VC05 210 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 CYHR1Q6ZMK1 362 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 OTOAQ7RTW8 1153 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 FAM124AQ86V42 546 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 C10orf107Q8IVU9 208 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 CPNE9Q8IYJ1 553 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 CAMKK1Q8N5S9 505 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 CCDC63Q8NA47 563 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 TSTD1Q8NFU3 115 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 STAG3L4Q8TBR4 150 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 LRRC8CQ8TDW0 803 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 SCYL1Q96KG9 808 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 LINC00615Q96LM1 132 aaPredicted RBP11.17□□□□□ -0.62
RTN1-203ENST00000395090 IER2Q9BTL4 223 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 MECRQ9BV79 373 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 TSSK1BQ9BXA7 367 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 LGR4Q9BXB1 951 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.17□□□□□ -0.62
RTN1-203ENST00000395090 C7orf69Q9H7B7 122 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 SARS2Q9NP81 518 aaKnown RBP11.17□□□□□ -0.62
RTN1-203ENST00000395090 CPSF2Q9P2I0 782 aaKnown RBP11.17□□□□□ -0.62
RTN1-203ENST00000395090 ATXN10Q9UBB4 475 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 XPR1Q9UBH6 696 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 SIT1Q9Y3P8 196 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 PRR23AA6NEV1 266 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 GPR89AB7ZAQ6 455 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 CHUKO15111 745 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 TRIM13O60858 407 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 ZNF217O75362 1048 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 GPC4O75487 556 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 SLCO2B1O94956 709 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 SEMA4FO95754 770 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 FTH1P02794 183 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 GSTM1P09488 218 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 GPR89BP0CG08 455 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 MYL2P10916 166 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 FGF3P11487 239 aaPredicted RBP11.17□□□□□ -0.62
RTN1-203ENST00000395090 ITGB6P18564 788 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 BGNP21810 368 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 CCR5P51681 352 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 PRKAA2P54646 552 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 IRF4Q15306 451 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 ACSBG2Q5FVE4 666 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 PLEKHS1Q5SXH7 462 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 CES4AQ5XG92 561 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 ANO7Q6IWH7 933 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 TMEM220Q6QAJ8 160 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 PRR23CQ6ZRP0 262 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 ZNF771Q7L3S4 317 aaPredicted RBP11.17□□□□□ -0.62
RTN1-203ENST00000395090 DET1Q7L5Y6 550 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 HEATR4Q86WZ0 1026 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 ZNF547Q8IVP9 402 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 DENND6BQ8NEG7 585 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 KLK6Q92876 244 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 FUBP1Q96AE4 644 aaKnown RBP11.17□□□□□ -0.62
RTN1-203ENST00000395090 LINGO1Q96FE5 620 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 SLC6A18Q96N87 628 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 ATOH8Q96SQ7 321 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 CCM2Q9BSQ5 444 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 UNKQ9C0B0 810 aaKnown RBP11.17□□□□□ -0.62
RTN1-203ENST00000395090 OR2AG1Q9H205 316 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 ALG9Q9H6U8 611 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 TPSG1Q9NRR2 321 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 WSB2Q9NYS7 404 aaPredicted RBP11.17□□□□□ -0.62
RTN1-203ENST00000395090 GULP1Q9UBP9 304 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms