RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 SLC22A17Q8WUG5 538 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 SLC32A1Q9H598 525 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 CFAP97Q9P2B7 532 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 EBF1Q9UH73 591 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 ADGRE2Q9UHX3 823 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 INTS6Q9UL03 887 aaKnown RBP12.03□□□□□ -0.48
RFC5-201ENST00000392542 SH3BP1Q9Y3L3 701 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 TRBV5-3A0A0A0MS03 114 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 EIF3FO00303 357 aaPredicted RBP12.03□□□□□ -0.48
RFC5-201ENST00000392542 SCELO95171 688 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 CKMP06732 381 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 BCKDHAP12694 445 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 TCF3P15923 654 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 EPORP19235 508 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 GABRR2P28476 465 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 RPIAP49247 311 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 NUP107P57740 925 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 SNRPD1P62314 119 aaKnown RBP12.03□□□□□ -0.48
RFC5-201ENST00000392542 CTBSQ01459 385 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 PMS2P3Q13401 168 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 DNAJC14Q6Y2X3 702 aaPredicted RBP12.03□□□□□ -0.48
RFC5-201ENST00000392542 STK32CQ86UX6 486 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 CLEC4FQ8N1N0 589 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 PNPT1Q8TCS8 783 aaKnown RBP12.03□□□□□ -0.48
RFC5-201ENST00000392542 VOPP1Q96AW1 172 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 C12orf43Q96C57 262 aaKnown RBP12.03□□□□□ -0.48
RFC5-201ENST00000392542 SLC47A1Q96FL8 570 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 CAPNS2Q96L46 248 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 COPS8Q99627 209 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 CXorf21Q9HAI6 301 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 IFT80Q9P2H3 777 aaPredicted RBP12.03□□□□□ -0.48
RFC5-201ENST00000392542 DNAJB9Q9UBS3 223 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 LIMD1Q9UGP4 676 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 ZNHIT2Q9UHR6 403 aa12.03□□□□□ -0.48
RFC5-201ENST00000392542 CXCR6O00574 342 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 SRCP12931 536 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 CCR7P32248 378 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 GGT5P36269 586 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 RPS14P62263 151 aaKnown RBP12.02□□□□□ -0.48
RFC5-201ENST00000392542 B4GALNT1Q00973 533 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 DCTN2Q13561 401 aaKnown RBP12.02□□□□□ -0.48
RFC5-201ENST00000392542 RAB39AQ14964 217 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 NKG7Q16617 165 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 LRRC23Q53EV4 343 aaPredicted RBP12.02□□□□□ -0.48
RFC5-201ENST00000392542 LRRC66Q68CR7 880 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 DHRS4L2Q6PKH6 230 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 KCTD8Q6ZWB6 473 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 LRRC70Q7Z2Q7 622 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 MICU2Q8IYU8 434 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 DNAJB8Q8NHS0 232 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 CLHC1Q8NHS4 586 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 ZNF420Q8TAQ5 688 aaPredicted RBP12.02□□□□□ -0.48
RFC5-201ENST00000392542 MRPS31Q92665 395 aaKnown RBP12.02□□□□□ -0.48
RFC5-201ENST00000392542 FAM162AQ96A26 154 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 SDCCAG3Q96C92 435 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 ECHDC3Q96DC8 303 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 MTFMTQ96DP5 389 aaKnown RBP12.02□□□□□ -0.48
RFC5-201ENST00000392542 ASIC4Q96FT7 647 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 SCRN2Q96FV2 425 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 RDH12Q96NR8 316 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 MUS81Q96NY9 551 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 OR52E6Q96RD3 313 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 ACPTQ9BZG2 426 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 ACTR8Q9H981 624 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 POLR1BQ9H9Y6 1135 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 ARL15Q9NXU5 204 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 CDC14AQ9UNH5 594 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 PDE10AQ9Y233 779 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 INVSQ9Y283 1065 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 PPIL1Q9Y3C6 166 aa12.02□□□□□ -0.48
RFC5-201ENST00000392542 FAM220BPB1ANY3 271 aa12.02□□□□□ -0.49
RFC5-201ENST00000392542 PDYNP01213 254 aa12.02□□□□□ -0.49
RFC5-201ENST00000392542 SHMT2P34897 504 aa12.02□□□□□ -0.49
RFC5-201ENST00000392542 CTSOP43234 321 aaPredicted RBP12.02□□□□□ -0.49
RFC5-201ENST00000392542 NRIP1P48552 1158 aa12.02□□□□□ -0.49
RFC5-201ENST00000392542 STK19P49842 368 aaPredicted RBP12.02□□□□□ -0.49
RFC5-201ENST00000392542 SLC7A9P82251 487 aa12.02□□□□□ -0.49
RFC5-201ENST00000392542 CPSF6Q16630 551 aaKnown RBP eCLIP12.02□□□□□ -0.49
RFC5-201ENST00000392542 GTDC1Q4AE62 458 aa12.02□□□□□ -0.49
RFC5-201ENST00000392542 ATP13A5Q4VNC0 1218 aa12.02□□□□□ -0.49
RFC5-201ENST00000392542 ATG9BQ674R7 924 aa12.02□□□□□ -0.49
RFC5-201ENST00000392542 USP45Q70EL2 814 aa12.02□□□□□ -0.49
RFC5-201ENST00000392542 UBE2R2Q712K3 238 aaPredicted RBP12.02□□□□□ -0.49
RFC5-201ENST00000392542 ZDHHC13Q8IUH4 622 aa12.02□□□□□ -0.49
RFC5-201ENST00000392542 PLPP6Q8IY26 295 aa12.02□□□□□ -0.49
RFC5-201ENST00000392542 TCAIMQ8N3R3 496 aa12.02□□□□□ -0.49
RFC5-201ENST00000392542 TERB1Q8NA31 727 aa12.02□□□□□ -0.49
RFC5-201ENST00000392542 TBCDQ9BTW9 1192 aa12.02□□□□□ -0.49
RFC5-201ENST00000392542 PAIP1Q9H074 479 aaKnown RBP12.02□□□□□ -0.49
RFC5-201ENST00000392542 MAGED1Q9Y5V3 778 aaPredicted RBP12.02□□□□□ -0.49
RFC5-201ENST00000392542 G3V2T6 193 aa12.01□□□□□ -0.49
RFC5-201ENST00000392542 AREL1O15033 823 aa12.01□□□□□ -0.49
RFC5-201ENST00000392542 ERN1O75460 977 aaKnown RBP12.01□□□□□ -0.49
RFC5-201ENST00000392542 CST1P01037 141 aa12.01□□□□□ -0.49
RFC5-201ENST00000392542 OR56A5P0C7T3 313 aa12.01□□□□□ -0.49
RFC5-201ENST00000392542 DCKP27707 260 aa12.01□□□□□ -0.49
RFC5-201ENST00000392542 YAP1P46937 504 aaKnown RBP12.01□□□□□ -0.49
RFC5-201ENST00000392542 CLDN8P56748 225 aa12.01□□□□□ -0.49
RFC5-201ENST00000392542 BIRC2Q13490 618 aa12.01□□□□□ -0.49
RFC5-201ENST00000392542 GGTA1PQ4G0N0 100 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms