RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 SCRN2Q96FV2 425 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 OTUB1Q96FW1 271 aaPredicted RBP2.93□□□□□ -1.94
PTPRC-205ENST00000391970 SGK494Q96LW2 274 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 ZNF583Q96ND8 569 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 PKP4Q99569 1192 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 EGFL8Q99944 293 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 GRPEL1Q9HAV7 217 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 OLFML3Q9NRN5 406 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 SERINC1Q9NRX5 453 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 SLC38A7Q9NVC3 462 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 B3GAT1Q9P2W7 334 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 LRWD1Q9UFC0 647 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 GTF3C4Q9UKN8 822 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 MTUS1Q9ULD2 1270 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 PCDH11YQ9BZA8 1340 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 FANCIQ9NVI1 1328 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 IGKV2D-30A0A075B6S6 120 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 IGLV5-45A0A087WSX0 123 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 TRAV34A0A0B4J273 112 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 A0A1W2PRB8 838 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 ARHGEF37A1IGU5 675 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 DENND3A2RUS2 1198 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 E9PI62 339 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 CCER2I3L3R5 266 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 CAPN9O14815 690 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 WDR46O15213 610 aaKnown RBP2.92□□□□□ -1.94
PTPRC-205ENST00000391970 AP5Z1O43299 807 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 RNASEH1O60930 286 aaKnown RBP2.92□□□□□ -1.94
PTPRC-205ENST00000391970 SIX3O95343 332 aaPredicted RBP2.92□□□□□ -1.94
PTPRC-205ENST00000391970 HAPLN1P10915 354 aaPredicted RBP2.92□□□□□ -1.94
PTPRC-205ENST00000391970 PTPN3P26045 913 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 TKTP29401 623 aaKnown RBP2.92□□□□□ -1.94
PTPRC-205ENST00000391970 CDC25CP30307 473 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 TLX1P31314 330 aaPredicted RBP2.92□□□□□ -1.94
PTPRC-205ENST00000391970 CCKARP32238 428 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 NR2C2P49116 596 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 CAPZA1P52907 286 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 ASIC2Q16515 512 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 ELFN2Q5R3F8 820 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 ABI3BPQ7Z7G0 1075 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 EXOC3L1Q86VI1 746 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 CFAP206Q8IYR0 622 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 ZNF611Q8N823 705 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 NPEPL1Q8NDH3 523 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 OR13J1Q8NGT2 312 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 GOT1L1Q8NHS2 421 aaPredicted RBP2.92□□□□□ -1.94
PTPRC-205ENST00000391970 ZNF473Q8WTR7 871 aaKnown RBP2.92□□□□□ -1.94
PTPRC-205ENST00000391970 CCDC107Q8WV48 283 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 MYADMQ96S97 322 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 CITED2Q99967 270 aaPredicted RBP2.92□□□□□ -1.94
PTPRC-205ENST00000391970 FERMT1Q9BQL6 677 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 PELI2Q9HAT8 420 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 ZNF701Q9NV72 531 aaPredicted RBP2.92□□□□□ -1.94
PTPRC-205ENST00000391970 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.92□□□□□ -1.94
PTPRC-205ENST00000391970 POMT1Q9Y6A1 747 aa2.92□□□□□ -1.94
PTPRC-205ENST00000391970 CENPJQ9HC77 1338 aaPredicted RBP2.92□□□□□ -1.94
PTPRC-205ENST00000391970 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 FAM170AA1A519 330 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 OR6C76A6NM76 312 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 H0Y626 953 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 C16orf97H3BN30 126 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 CSN3P07498 182 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 HSP90AB1P08238 724 aaKnown RBP2.91□□□□□ -1.94
PTPRC-205ENST00000391970 INHBAP08476 426 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 SMIM18P0DKX4 95 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 SAGP10523 405 aaPredicted RBP2.91□□□□□ -1.94
PTPRC-205ENST00000391970 CETPP11597 493 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 PDGFRAP16234 1089 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 ADRA2CP18825 462 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 NR1D1P20393 614 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 MSH3P20585 1137 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 TCEA1P23193 301 aaKnown RBP2.91□□□□□ -1.94
PTPRC-205ENST00000391970 PSMA3P25788 255 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 HOXC13P31276 330 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 PTGER4P35408 488 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 BMXP51813 675 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 PDX1P52945 283 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 DVL1P1P54792 670 aaPredicted RBP2.91□□□□□ -1.94
PTPRC-205ENST00000391970 NAGLUP54802 743 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 DMPKQ09013 629 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 CUL3Q13618 768 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 ITGA7Q13683 1181 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 TUBB2AQ13885 445 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 CA9Q16790 459 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 TCTE1Q5JU00 501 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 MPP7Q5T2T1 576 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 WBP2NLQ6ICG8 309 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 SHQ1Q6PI26 577 aaKnown RBP2.91□□□□□ -1.94
PTPRC-205ENST00000391970 C11orf57Q6ZUT1 292 aaPredicted RBP2.91□□□□□ -1.94
PTPRC-205ENST00000391970 C9orf139Q6ZV77 190 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 NUP54Q7Z3B4 507 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 ARHGAP22Q7Z5H3 698 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 SPATA19Q7Z5L4 167 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 NFE4Q86UQ8 179 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 PLD3Q8IV08 490 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 RFLNBQ8N5W9 214 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 METTL27Q8N6F8 245 aaPredicted RBP2.91□□□□□ -1.94
PTPRC-205ENST00000391970 C9orf106Q8NAJ2 232 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 SLC24A4Q8NFF2 622 aa2.91□□□□□ -1.94
PTPRC-205ENST00000391970 OR2T12Q8NG77 320 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms