RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 MGME1Q9BQP7 344 aa13.75□□□□□ -0.21
SNPH-201ENST00000381867 RNF186Q9NXI6 227 aa13.75□□□□□ -0.21
SNPH-201ENST00000381867 STYXL1Q9Y6J8 313 aa13.75□□□□□ -0.21
SNPH-201ENST00000381867 A0A0G2JPF8 293 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 MAGEB17A8MXT2 336 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 HNRNPCL3B7ZW38 293 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 PRAMEF1O95521 474 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 IFNA7P01567 189 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 YES1P07947 543 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 HNRNPCL4P0DMR1 293 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 SLC6A4P31645 630 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 PRKD1Q15139 912 aaPredicted RBP13.74□□□□□ -0.21
SNPH-201ENST00000381867 FSTL5Q8N475 847 aaPredicted RBP13.74□□□□□ -0.21
SNPH-201ENST00000381867 ZBTB8BQ8NAP8 495 aaPredicted RBP13.74□□□□□ -0.21
SNPH-201ENST00000381867 GPER1Q99527 375 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 CDADC1Q9BWV3 514 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 CST11Q9H112 138 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 EQTNQ9NQ60 294 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 A0A1W2PQ45 241 aaPredicted RBP13.74□□□□□ -0.21
SNPH-201ENST00000381867 A0A1W2PQY0 241 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 LAMP2P13473 410 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 CD247P20963 164 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 ASPAP45381 313 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 KLHL22Q53GT1 634 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 PITRM1Q5JRX3 1037 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 FRRS1Q6ZNA5 592 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 DNAJB8Q8NHS0 232 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 SLC13A3Q8WWT9 602 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 ASB9Q96DX5 294 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 ZNF347Q96SE7 839 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 EIF2B3Q9NR50 452 aaKnown RBP13.74□□□□□ -0.21
SNPH-201ENST00000381867 NME6O75414 186 aaPredicted RBP13.74□□□□□ -0.21
SNPH-201ENST00000381867 SNAP47Q5SQN1 464 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 ANKS1BQ7Z6G8 1248 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 PARGQ86W56 976 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 TMC8Q8IU68 726 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 ZNF567Q8N184 647 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 C8orf48Q96LL4 319 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 EBF4Q9BQW3 602 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 FNIP2Q9P278 1114 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 STOX2Q9P2F5 926 aaPredicted RBP13.74□□□□□ -0.21
SNPH-201ENST00000381867 MTRRQ9UBK8 725 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 GPN3Q9UHW5 284 aaPredicted RBP13.74□□□□□ -0.21
SNPH-201ENST00000381867 WRBO00258 174 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 PLOD2O00469 737 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 KRT33AO76009 404 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 OR4F21O95013 312 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 C8BP07358 591 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 ELFN1P0C7U0 828 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 CDH1P12830 882 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 HSPA7P48741 367 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 SLC51AQ86UW1 340 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 PEX5LQ8IYB4 626 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 SLC43A3Q8NBI5 491 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 ZNF563Q8TA94 476 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 C9orf43Q8TAL5 461 aaPredicted RBP13.74□□□□□ -0.21
SNPH-201ENST00000381867 PCED1BQ96HM7 432 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 MAGEH1Q9H213 219 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 DEC1Q9P2X7 70 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 MRPS33Q9Y291 106 aaKnown RBP13.74□□□□□ -0.21
SNPH-201ENST00000381867 HCN1O60741 890 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 DAOAP59103 153 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 TMEM44Q2T9K0 475 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 FAM91A1Q658Y4 838 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 ANO7Q6IWH7 933 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 GPALPP1Q8IXQ4 340 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 CLIP4Q8N3C7 705 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 PHC3Q8NDX5 983 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 FAM84AQ96KN4 292 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 SAMD11Q96NU1 681 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 SLC6A15Q9H2J7 730 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 GDAP2Q9NXN4 497 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 NOCTQ9UK39 431 aaKnown RBP13.74□□□□□ -0.21
SNPH-201ENST00000381867 ANKRD36CQ5JPF3 1778 aa13.74□□□□□ -0.21
SNPH-201ENST00000381867 ACOX3O15254 700 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 GIMD1P0DJR0 217 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 TACR2P21452 398 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 KELP23276 732 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 CCND3P30281 292 aaPredicted RBP13.73□□□□□ -0.21
SNPH-201ENST00000381867 FMO3P31513 532 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 NDST2P52849 883 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 ZDHHC24Q6UX98 284 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 ATAD1Q8NBU5 361 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 ACAT2Q9BWD1 397 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 SMURF2Q9HAU4 748 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 A0A1B0GVM2 712 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 FAM234BA2RU67 622 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 TCAF2A6NFQ2 919 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 XKRYO14609 159 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 GADD45GO95257 159 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 WDR4P57081 412 aaKnown RBP13.73□□□□□ -0.21
SNPH-201ENST00000381867 BNIP3Q12983 259 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 IDNKQ5T6J7 187 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 CHST4Q8NCG5 386 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 COMMD3Q9UBI1 195 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 MALT1Q9UDY8 824 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 MRTO4Q9UKD2 239 aaKnown RBP13.73□□□□□ -0.21
SNPH-201ENST00000381867 PRELID1Q9Y255 219 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 PITPNM1O00562 1244 aa13.73□□□□□ -0.21
SNPH-201ENST00000381867 IFI30P13284 250 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms