RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 NEU1Q99519 415 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 NDNQ99608 321 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 GPR22Q99680 433 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 RTP3Q9BQQ7 232 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 KIFC1Q9BW19 673 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 TRIM4Q9C037 500 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 TRPV6Q9H1D0 765 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 RHOJQ9H4E5 214 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 COPS7BQ9H9Q2 264 aaPredicted RBP3.7□□□□□ -1.82
SMC6-202ENST00000381272 GLOD4Q9HC38 313 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 ZDHHC7Q9NXF8 308 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 GTSE1Q9NYZ3 720 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 XPR1Q9UBH6 696 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 DKK2Q9UBU2 259 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 PCDHGB4Q9UN71 923 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 ST3GAL5Q9UNP4 418 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 CDYLQ9Y232 598 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 ANKRD6Q9Y2G4 727 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 ACOT9Q9Y305 439 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 DTNAQ9Y4J8 743 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 PCDHGB5Q9Y5G0 923 aa3.7□□□□□ -1.82
SMC6-202ENST00000381272 TTC3P53804 2025 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 CENPFP49454 3210 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 FNDC1Q4ZHG4 1894 aaPredicted RBP3.69□□□□□ -1.82
SMC6-202ENST00000381272 TRPM7Q96QT4 1865 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 MYADML2A6NDP7 307 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 KCNU1A8MYU2 1149 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 F8W810 466 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 OVOL3O00110 214 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 CCL22O00626 93 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 PSMD3O43242 534 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 OR6B1O95007 311 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 MOCS2O96007 188 aaPredicted RBP3.69□□□□□ -1.82
SMC6-202ENST00000381272 F9P00740 461 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 CFIP05156 583 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 HLA-DQB2P05538 268 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 APOA4P06727 396 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 ETS2P15036 469 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 STMN1P16949 149 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 TSPAN8P19075 237 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 HDCP19113 662 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 KCNA5P22460 613 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 PAX3P23760 479 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 CCNCP24863 283 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 PPARGP37231 505 aaPredicted RBP3.69□□□□□ -1.82
SMC6-202ENST00000381272 HADHAP40939 763 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 SLC1A2P43004 574 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 SLC6A9P48067 706 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 ARCN1P48444 511 aaKnown RBP3.69□□□□□ -1.82
SMC6-202ENST00000381272 PLK1P53350 603 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 TAS2R39P59534 338 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 RAB10P61026 200 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 COG7P83436 770 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 ITKQ08881 620 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 NSUN2Q08J23 767 aaKnown RBP eCLIP3.69□□□□□ -1.82
SMC6-202ENST00000381272 PRKAA1Q13131 559 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 BIRC2Q13490 618 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 FLOT2Q14254 428 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 CSHL1Q14406 222 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 GK3PQ14409 553 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 UBXN2BQ14CS0 331 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 SPDYE7PQ495Y7 208 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 LIN52Q52LA3 116 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 PIGGQ5H8A4 983 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 SH2D4BQ5SQS7 431 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 RBM20Q5T481 1227 aaKnown RBP3.69□□□□□ -1.82
SMC6-202ENST00000381272 OGFRL1Q5TC84 451 aaPredicted RBP3.69□□□□□ -1.82
SMC6-202ENST00000381272 IL31Q6EBC2 164 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 ZNF470Q6ECI4 717 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 ZNF529Q6P280 563 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 DCLRE1AQ6PJP8 1040 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 ANKRD23Q86SG2 305 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 LINC00523Q86TU6 105 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 LDB1Q86U70 411 aaPredicted RBP3.69□□□□□ -1.82
SMC6-202ENST00000381272 SATL1Q86VE3 508 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 ST13P4Q8IZP2 240 aaPredicted RBP3.69□□□□□ -1.82
SMC6-202ENST00000381272 TMEM86AQ8N2M4 240 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 GALNT15Q8N3T1 639 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 GALNT4Q8N4A0 578 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 ATPAF2Q8N5M1 289 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 CPSF7Q8N684 471 aaKnown RBP3.69□□□□□ -1.82
SMC6-202ENST00000381272 PCDH20Q8N6Y1 951 aaKnown RBP3.69□□□□□ -1.82
SMC6-202ENST00000381272 SNX31Q8N9S9 440 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 PPHLN1Q8NEY8 458 aaKnown RBP3.69□□□□□ -1.82
SMC6-202ENST00000381272 RP9Q8TA86 221 aaKnown RBP3.69□□□□□ -1.82
SMC6-202ENST00000381272 RDH11Q8TC12 318 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 CASP10Q92851 521 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 TMA16Q96EY4 203 aaKnown RBP3.69□□□□□ -1.82
SMC6-202ENST00000381272 PGAP3Q96FM1 320 aaPredicted RBP3.69□□□□□ -1.82
SMC6-202ENST00000381272 DCUN1D1Q96GG9 259 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 SMARCD1Q96GM5 515 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 FUBP3Q96I24 572 aaKnown RBP eCLIP3.69□□□□□ -1.82
SMC6-202ENST00000381272 TSGA13Q96PP4 275 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 TSPAN18Q96SJ8 248 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 VAT1Q99536 393 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 PKP2Q99959 881 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 BRD8Q9H0E9 1235 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 VCX3BQ9H321 246 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 TOR3AQ9H497 397 aa3.69□□□□□ -1.82
SMC6-202ENST00000381272 POMKQ9H5K3 350 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms