RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 MFSD3Q96ES6 412 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 ABHD17AQ96GS6 310 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 PPM1MQ96MI6 270 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 FERD3LQ96RJ6 166 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 TRIM51Q9BSJ1 452 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 SRMSQ9H3Y6 488 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 XAB2Q9HCS7 855 aaKnown RBP18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 FLNBO75369 2602 aaKnown RBP18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 QSOX1O00391 747 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 IFRD1O00458 451 aaPredicted RBP18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 BTN3A3O00478 584 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 TTI1O43156 1089 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 CPNE3O75131 537 aaKnown RBP18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 NTRK1P04629 796 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 IVDP26440 423 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 ARNTP27540 789 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 ACADLP28330 430 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 MAGEA3P43357 314 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 PRKAA1Q13131 559 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 KRT33BQ14525 404 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 GPR19Q15760 415 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 IZUMO3Q5VZ72 239 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 C16orf46Q6P387 395 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 ZNF449Q6P9G9 518 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 SYDE1Q6ZW31 735 aaPredicted RBP18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 ADGRF3Q8IZF5 1079 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 AGGF1Q8N302 714 aaeCLIP18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 SLC38A9Q8NBW4 561 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 PHC3Q8NDX5 983 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 OR52E1Q8NGJ3 308 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 C9orf43Q8TAL5 461 aaPredicted RBP18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 SEC14L1Q92503 715 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 RNF31Q96EP0 1072 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 KRT12Q99456 494 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 TRIM56Q9BRZ2 755 aaKnown RBP18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 MARCH4Q9P2E8 410 aaPredicted RBP18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 POLHQ9Y253 713 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 PRSS21Q9Y6M0 314 aa18.34■□□□□ 0.53
TMEM88B-201ENST00000378821 SLC9B1P1A6NJY1 282 aa18.33■□□□□ 0.52
TMEM88B-201ENST00000378821 PYCARD-AS1I3L0S3 204 aa18.33■□□□□ 0.52
TMEM88B-201ENST00000378821 BTN3A1O00481 513 aa18.33■□□□□ 0.52
TMEM88B-201ENST00000378821 PTPN4P29074 926 aa18.33■□□□□ 0.52
TMEM88B-201ENST00000378821 ARCN1P48444 511 aaKnown RBP18.33■□□□□ 0.52
TMEM88B-201ENST00000378821 ERV3-1Q14264 604 aa18.33■□□□□ 0.52
TMEM88B-201ENST00000378821 FASTKD1Q53R41 847 aaKnown RBP18.33■□□□□ 0.52
TMEM88B-201ENST00000378821 ZNF789Q5FWF6 425 aa18.33■□□□□ 0.52
TMEM88B-201ENST00000378821 LYPLAL1Q5VWZ2 237 aa18.33■□□□□ 0.52
TMEM88B-201ENST00000378821 CASC4Q6P4E1 433 aa18.33■□□□□ 0.52
TMEM88B-201ENST00000378821 FBXO38Q6PIJ6 1188 aa18.33■□□□□ 0.52
TMEM88B-201ENST00000378821 APLFQ8IW19 511 aaPredicted RBP18.33■□□□□ 0.52
TMEM88B-201ENST00000378821 ACTL8Q9H568 366 aa18.33■□□□□ 0.52
TMEM88B-201ENST00000378821 CATSPERZQ9NTU4 200 aa18.33■□□□□ 0.52
TMEM88B-201ENST00000378821 ANAPC2Q9UJX6 822 aa18.33■□□□□ 0.52
TMEM88B-201ENST00000378821 SLC5A10A0PJK1 596 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 OR1I1O60431 355 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 KATNA1O75449 491 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 SCRG1O75711 98 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 FTH1P02794 183 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 CDH3P22223 829 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 PREPP48147 710 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 PMS2P54278 862 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 PLOD1Q02809 727 aaPredicted RBP18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 C2orf54Q08AI8 447 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 GPS2Q13227 327 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 DHX34Q14147 1143 aaKnown RBP18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 PLEKHS1Q5SXH7 462 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 ARMC3Q5W041 872 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 LDB1Q86U70 411 aaPredicted RBP18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 AMIGO1Q86WK6 493 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 SPATA4Q8NEY3 305 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 NRTNQ99748 197 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 CHRNA10Q9GZZ6 450 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 SAMD15Q9P1V8 674 aa18.32■□□□□ 0.52
TMEM88B-201ENST00000378821 PIPSLA2A3N6 862 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 SDR42E2A6NKP2 422 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 C2orf74A8MZ97 194 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 BHMG1C9JSJ3 638 aaPredicted RBP18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 CD3EAPO15446 510 aaKnown RBP18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 TPBGLP0DKB5 382 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 ST6GAL1P15907 406 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 RORAP35398 523 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 CASRP41180 1078 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 MRPS25P82663 173 aaKnown RBP18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 UGT8Q16880 541 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 KIAA0930Q6ICG6 404 aaPredicted RBP18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 TCTN3Q6NUS6 607 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 FAM199XQ6PEV8 388 aaPredicted RBP18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 PCGF5Q86SE9 256 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 SYVN1Q86TM6 617 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 TMEM135Q86UB9 458 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 HOOK3Q86VS8 718 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 PTRH1Q86Y79 214 aaKnown RBP18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 TMEM126BQ8IUX1 230 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 DSELQ8IZU8 1212 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 ZNF669Q96BR6 464 aaPredicted RBP18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 SIGLEC10Q96LC7 697 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 TRAPPC9Q96Q05 1148 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 RUFY1Q96T51 708 aa18.31■□□□□ 0.52
TMEM88B-201ENST00000378821 TRIM4Q9C037 500 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms