RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 RAD1O60671 282 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 STK17BO94768 372 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 ZBTB11O95625 1053 aaPredicted RBP16.48■□□□□ 0.23
RER1-202ENST00000378512 S1PR4O95977 384 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 ESR1P03372 595 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 ITGB2P05107 769 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 APOA4P06727 396 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 FOLR1P15328 257 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 PRDX3P30048 256 aaKnown RBP16.48■□□□□ 0.23
RER1-202ENST00000378512 ETF1P62495 437 aaKnown RBP16.48■□□□□ 0.23
RER1-202ENST00000378512 HSD11B2P80365 405 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 DR1Q01658 176 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 PRKG2Q13237 762 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 GRB7Q14451 532 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.48■□□□□ 0.23
RER1-202ENST00000378512 PLEKHS1Q5SXH7 462 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 PTRHD1Q6GMV3 140 aaKnown RBP16.48■□□□□ 0.23
RER1-202ENST00000378512 CYB5D1Q6P9G0 228 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 UNC5DQ6UXZ4 953 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 BPHLQ86WA6 291 aaPredicted RBP16.48■□□□□ 0.23
RER1-202ENST00000378512 CACNA2D3Q8IZS8 1091 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 IL22RA1Q8N6P7 574 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 FLVCR1-AS1Q8TAF5 88 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 PPM1MQ96MI6 270 aa16.48■□□□□ 0.23
RER1-202ENST00000378512 FLNBO75369 2602 aaKnown RBP16.48■□□□□ 0.23
RER1-202ENST00000378512 UBA6A0AVT1 1052 aaPredicted RBP16.47■□□□□ 0.23
RER1-202ENST00000378512 H3BMM5 538 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 PFDN6O15212 129 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 MAP4P27816 1152 aaKnown RBP16.47■□□□□ 0.23
RER1-202ENST00000378512 SHMT2P34897 504 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 PAFAH1B1P43034 410 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 ATP1A2P50993 1020 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 EIF3BP55884 814 aaKnown RBP16.47■□□□□ 0.23
RER1-202ENST00000378512 FOXM1Q08050 763 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 PRKAA1Q13131 559 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 MORF4L2Q15014 288 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 KYNUQ16719 465 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 MSS51Q4VC12 460 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 ZNF789Q5FWF6 425 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 IZUMO3Q5VZ72 239 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 HIBCHQ6NVY1 386 aaPredicted RBP16.47■□□□□ 0.23
RER1-202ENST00000378512 ARMC6Q6NXE6 501 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 KLHL7Q8IXQ5 586 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 NLGN4XQ8N0W4 816 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 ZSCAN1Q8NBB4 408 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 SIDT2Q8NBJ9 832 aaKnown RBP16.47■□□□□ 0.23
RER1-202ENST00000378512 NLGN4YQ8NFZ3 816 aaPredicted RBP16.47■□□□□ 0.23
RER1-202ENST00000378512 STAMBPL1Q96FJ0 436 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 STARD5Q9NSY2 213 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 IL1RAPL1Q9NZN1 696 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 OR6C2Q9NZP2 312 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 VPS9D1Q9Y2B5 631 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 MED16Q9Y2X0 877 aa16.47■□□□□ 0.23
RER1-202ENST00000378512 LOC101059948A0A1B0GTJ6 334 aa16.46■□□□□ 0.23
RER1-202ENST00000378512 ZNF28P17035 718 aa16.46■□□□□ 0.23
RER1-202ENST00000378512 ATP5DP30049 168 aa16.46■□□□□ 0.23
RER1-202ENST00000378512 ACY1Q03154 408 aa16.46■□□□□ 0.23
RER1-202ENST00000378512 DHX9Q08211 1270 aaKnown RBP16.46■□□□□ 0.23
RER1-202ENST00000378512 ABHD18Q0P651 414 aa16.46■□□□□ 0.23
RER1-202ENST00000378512 LONRF1Q17RB8 773 aa16.46■□□□□ 0.23
RER1-202ENST00000378512 ZNF470Q6ECI4 717 aa16.46■□□□□ 0.23
RER1-202ENST00000378512 UNC5AQ6ZN44 842 aa16.46■□□□□ 0.23
RER1-202ENST00000378512 ZNF501Q96CX3 271 aaPredicted RBP16.46■□□□□ 0.23
RER1-202ENST00000378512 EBNA1BP2Q99848 306 aaKnown RBP16.46■□□□□ 0.23
RER1-202ENST00000378512 NAT9Q9BTE0 207 aa16.46■□□□□ 0.23
RER1-202ENST00000378512 CHRNA10Q9GZZ6 450 aa16.46■□□□□ 0.23
RER1-202ENST00000378512 XKR8Q9H6D3 395 aa16.46■□□□□ 0.23
RER1-202ENST00000378512 PLAC1Q9HBJ0 212 aa16.46■□□□□ 0.23
RER1-202ENST00000378512 CRYL1Q9Y2S2 319 aa16.46■□□□□ 0.23
RER1-202ENST00000378512 SPTBP11277 2137 aa16.46■□□□□ 0.23
RER1-202ENST00000378512 C2orf74A8MZ97 194 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 NKX2-8O15522 239 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 TTI1O43156 1089 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 NIPSNAP2O75323 286 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 SPAG6O75602 509 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 SEC31AO94979 1220 aaKnown RBP16.45■□□□□ 0.22
RER1-202ENST00000378512 MATN4O95460 622 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 TTC4O95801 387 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 EBLN1P0CF75 366 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 PKMP14618 531 aaKnown RBP16.45■□□□□ 0.22
RER1-202ENST00000378512 PGAM1P18669 254 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 FMO4P31512 558 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 CSE1LP55060 971 aaKnown RBP16.45■□□□□ 0.22
RER1-202ENST00000378512 TUBB3Q13509 450 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 KCNAB1Q14722 419 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 CRYMQ14894 314 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 TMED2Q15363 201 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 OTOAQ7RTW8 1153 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 PPP1R3BQ86XI6 285 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 DCUN1D3Q8IWE4 304 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 DENND6AQ8IWF6 608 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 C17orf53Q8N3J3 647 aaPredicted RBP16.45■□□□□ 0.22
RER1-202ENST00000378512 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.45■□□□□ 0.22
RER1-202ENST00000378512 CALML6Q8TD86 181 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 TRAPPC9Q96Q05 1148 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 OR2A14Q96R47 310 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 SYTL2Q9HCH5 934 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 PDE7BQ9NP56 450 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 FGF21Q9NSA1 209 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 ACTR10Q9NZ32 417 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms